@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXH2: (2018-01-04 )
MAFESLTERLQQAMGKIRKKGKVSEADVKEMMREIRLALLEADVNLQVVKDFTKRVRERAVGAEVLESLSPAQQIVKIVDEELTITLGSETAELNKSPKIPTVIMMAGLQGAGKTTFTGKLANYLKKNENARPLLIAGDVYRPAAIDQLKVLGQQLDVPVFDMGTEVSPVEIVRQGMELAKEKKNDYVLIDTAGRLHIDETLMDELKQIKELTQPNEILLVVDAMTGQDAVNVADSFNQQLGITGVVITKLDGDTRGGAALSIRSVTGAPIKFIGSGEKLTDLEVFHPDRMASRILGMGDMLTLIEKAQQDYDEKKAEELAQKMRENSFDFNDFIEQLDQVMGMGPLEDLIKMIPGMNQVPGIENVKVDPKDVERKKAMVYSMTPAERANPDLLNPSRRRRIAAGSGNSVVEVNRMIKQFKESRKMMQQMSKGDMNIPGMDQMFGSGVKGKLGKMAMNRMIKKNKKKKKKRK

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GCP_D_13(5L3R)
CFTSY_ARATH
[Raw transfer]



GCP_B_7(5L3R)
CFTSY_ARATH
[Raw transfer]



GCP_B_7(5L3R)
CFTSY_ARATH
[Raw transfer]



GDP_A_6(1O87)
SRP54_THEAQ
[Raw transfer]



GDP_B_6(5L3V)
SRP54_SULSO
[Raw transfer]



GCP_B_6(1RJ9)
SRP54_THEAQ
[Raw transfer]



GDP_B_11(4C7O)
FTSY_ECOLI
[Raw transfer]



GDP_A_3(5L3V)
SRP54_SULSO
[Raw transfer]



GNP_B_20(2J7P)
SRP54_THEAQ
[Raw transfer]



GNP_A_12(2J7P)
SRP54_THEAQ
[Raw transfer]



CIT_B_4(1VMA)
?
[Raw transfer]



GNP_B_5(1JPN)
SRP54_THEAQ
[Raw transfer]



GNP_A_6(1JPN)
SRP54_THEAQ
[Raw transfer]



GNP_B_2(1JPJ)
SRP54_THEAQ
[Raw transfer]



GDP_D_17(4C7O)
FTSY_ECOLI
[Raw transfer]



GDP_B_12(1O87)
SRP54_THEAQ
[Raw transfer]



GDP_B_2(2NG1)
SRP54_THEAQ
[Raw transfer]



GDP_A_7(1NG1)
SRP54_THEAQ
[Raw transfer]



GNP_B_14(5L3Q)
SRP54_HUMAN
[Raw transfer]



GCP_D_17(1OKK)
SRP54_THEAQ
[Raw transfer]



GNP_D_25(5L3Q)
SRP54_HUMAN
[Raw transfer]



GCP_B_7(5L3R)
SR54C_ARATH
[Raw transfer]



GDP_B_11(4C7O)
SRP54_ECOLI
[Raw transfer]



GCP_D_13(5L3R)
SR54C_ARATH
[Raw transfer]



GDP_D_17(4C7O)
SRP54_ECOLI
[Raw transfer]



GCP_D_13(5L3R)
SR54C_ARATH
[Raw transfer]



GCP_D_17(1OKK)
FTSY_THEAQ
[Raw transfer]



GOL_B_14(3DMD)
?
[Raw transfer]



OXY_A_3(1LS1)
SRP54_THEAQ
[Raw transfer]



FMT_B_11(1O87)
SRP54_THEAQ
[Raw transfer]



GNP_K_11(2Q9C)
FTSY_THEAQ
[Raw transfer]



EDO_B_13(3NG1)
SRP54_THEAQ
[Raw transfer]



GNP_T_20(2Q9B)
FTSY_THEAQ
[Raw transfer]



GDP_D_2(2IYL)
FTSY_THEAQ
[Raw transfer]



EDO_A_6(2J7P)
SRP54_THEAQ
[Raw transfer]



GDP_D_18(4C7O)
SRP54_ECOLI
[Raw transfer]



GDP_D_18(4C7O)
SRP54_ECOLI
[Raw transfer]



GNP_B_20(2J7P)
FTSY_THEAQ
[Raw transfer]



EDO_A_2(2YHS)
FTSY_ECOLI
[Raw transfer]



EDO_A_12(3NG1)
SRP54_THEAQ
[Raw transfer]



GCP_B_6(1RJ9)
FTSY_THEAQ
[Raw transfer]



EDO_B_14(3NG1)
SRP54_THEAQ
[Raw transfer]



AMP_A_9(5L3Q)
SRP54_HUMAN
[Raw transfer]



AMP_C_22(5L3Q)
SRP54_HUMAN
[Raw transfer]



ACY_B_7(1JPN)
SRP54_THEAQ
[Raw transfer]



GNP_A_12(2J7P)
FTSY_THEAQ
[Raw transfer]
1 PsiBlast_PDB 85.9551% -72 - C5 -2XXA - SRP54_ECOLI -
21 PsiBlast_CBE 84.6851% -77 - C5 -2XXA - SRP54_ECOLI -
17 PsiBlast_PDB 80.1936% -75 - C6 -3DM5 - SRP54_PYRFU -
103 HHSearch 80.1737% -76 - C6 -3DM5 - SRP54_PYRFU -
105 HHSearch 79.8854%-105 - C5 -4C7O 4.0 SRP54_ECOLI
24 PsiBlast_CBE 79.8854%-105 - C5 -4C7O 4.0 SRP54_ECOLI
7 PsiBlast_PDB 78.0940% 0 - C- -3NDB - SRP54_METJA -
3 PsiBlast_PDB 78.0645% - - C5 -2IY3 - SRP54_SULSO (first) -
4 PsiBlast_PDB 77.9054%-107 - C5 -4C7O 3.0 SRP54_ECOLI
119 HHSearch 77.5254%-117 - C5 -5L3R 2.8 SR54C_ARATH
104 HHSearch 77.3837% -80 - C6 -3DM5 - SRP54_PYRFU -
25 PsiBlast_CBE 77.2053%-117 - C5 -5L3R 2.8 SR54C_ARATH
32 PsiBlast_CBE 77.1436% -79 * C6 *3DM5 - SRP54_PYRFU -
5 PsiBlast_PDB 75.9853%-118 - C5 -5L3R 2.9 SR54C_ARATH
2 PsiBlast_PDB 72.4047% 27 - C6 -2FFH - SRP54_THEAQ -
10 PsiBlast_PDB 68.6250% 6 - C5 -2C04 - SRP54_THEAQ -
16 PsiBlast_PDB 68.2651% 4 - C5 -1RY1 - SRP54_THEAQ -
13 PsiBlast_PDB 68.2650% 6 - C5 -2C03 - SRP54_THEAQ -
31 PsiBlast_CBE 68.1751% 8 - C5 -1JPN 6.5 SRP54_THEAQ
18 PsiBlast_PDB 68.1550% -7 - C5 -1LS1 3.1 SRP54_THEAQ
29 PsiBlast_CBE 67.6450% 14 - C5 -1O87 7.3 SRP54_THEAQ
15 PsiBlast_PDB 67.6051% 15 - C5 -1JPN 7.4 SRP54_THEAQ
14 PsiBlast_PDB 67.5151% 4 - C5 -1JPJ 7.6 SRP54_THEAQ
9 PsiBlast_PDB 67.4050% 11 - C5 -1O87 7.3 SRP54_THEAQ
41 PsiBlast_CBE 67.3350% 5 - C5 -1NG1 7.3 SRP54_THEAQ
33 PsiBlast_CBE 67.0650% 5 - C5 -3NG1 3.7 SRP54_THEAQ
36 PsiBlast_CBE 66.8650% 14 - C5 -2J7P 9.3 SRP54_THEAQ
40 PsiBlast_CBE 66.8450% 14 - C5 -1OKK 2.9 SRP54_THEAQ
34 PsiBlast_CBE 66.7450% 5 - C5 -3NG1 3.7 SRP54_THEAQ
35 PsiBlast_CBE 66.2950% 16 - C5 -2J7P 9.3 SRP54_THEAQ
46 PsiBlast_CBE 65.3338% -36 - C5 -5L3V 8.6 SRP54_SULSO
44 PsiBlast_CBE 65.2731%-115 - C5 -5L3Q 3.8 SRP54_HUMAN
42 PsiBlast_CBE 65.0650% 16 - C5 -2NG1 6.2 SRP54_THEAQ
45 PsiBlast_CBE 64.8631%-113 - C5 -5L3Q 3.8 SRP54_HUMAN
47 PsiBlast_CBE 64.0938% -31 - C5 -5L3V 7.3 SRP54_SULSO
8 PsiBlast_PDB 63.2250% 26 - C5 -1RJ9 9.4 SRP54_THEAQ
59 PsiBlast_CBE 61.4437% -29 - C5 -5L3R 8.5 CFTSY_ARATH
58 PsiBlast_CBE 60.9337% -29 - C5 -5L3R 8.7 CFTSY_ARATH
70 PsiBlast_CBE 60.2735% -50 - C5 -1VMA 3.9 ?
116 HHSearch 59.3635% -14 - C5 -5L3R 8.5 CFTSY_ARATH
67 PsiBlast_CBE 54.1935% -32 - C5 -4C7O 7.3 FTSY_ECOLI
69 PsiBlast_CBE 53.7536% -43 - C5 -2YHS 2.9 FTSY_ECOLI
68 PsiBlast_CBE 53.6335% -28 - C5 -4C7O 7.0 FTSY_ECOLI
84 PsiBlast_CBE 48.4936% -11 - C5 -2J7P 2.9 FTSY_THEAQ
79 PsiBlast_CBE 48.4036% -20 - C5 -2IYL 5.1 FTSY_THEAQ
85 PsiBlast_CBE 48.3435% -21 - C5 -1RJ9 2.9 FTSY_THEAQ
78 PsiBlast_CBE 48.0036% -20 - C5 -1OKK 7.4 FTSY_THEAQ
83 PsiBlast_CBE 47.9336% -9 - C5 -2J7P 2.9 FTSY_THEAQ
73 PsiBlast_CBE 46.5636% -26 - C5 -2Q9C 5.0 FTSY_THEAQ
75 PsiBlast_CBE 46.4336% -20 - C5 -2Q9B 4.4 FTSY_THEAQ