@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXH5: (2018-01-04 )
MNSLTSTYRLSNGYEIPVVGFGTWQTPDGDVAVSSVKEALAAGYRHIDTAQGYKNEESVGQAIKESGIPREEIFLTTKLWNANHSYELVMSSFEESLKKLQTDYLDLFLIHWPNPVAFRDNWEQANADTWRAFEELYEAGKIKAIGVSNFLPHHLDTLAKTAKIMPMVNQVFLAPGELQTTVVEYAKKHDMILEAYSPLGTGKIFDVPEMKQIAEAHDKTIAQVALRWSLQHEFLPLPKSVTPSRIKENTELFDFELTEEEMKQIDQLDGVVGKAKDPDTTQF

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_4(4G5D)
PGFS_LEIMA
[Raw transfer]



NAP_B_2(1A80)
DKGA_CORSC
[Raw transfer]



NDP_A_3(4G5D)
PGFS_LEIMA
[Raw transfer]



NDP_A_3(4G5D)
PGFS_LEIMA
[Raw transfer]



NAD_C_3(1M9H)
DKGA_CORSC
[Raw transfer]



NAP_X_2(1ZUA)
AK1BA_HUMAN
[Raw transfer]



NAP_A_2(3H7U)
AKRC9_ARATH
[Raw transfer]



NAP_A_2(4GA8)
AK1BA_HUMAN
[Raw transfer]



NAP_A_2(4GAB)
AK1BA_HUMAN
[Raw transfer]



NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]



NAP_D_4(1VBJ)
PGFS_TRYBB
[Raw transfer]



NAP_C_3(1VBJ)
PGFS_TRYBB
[Raw transfer]



NAP_A_2(4GQG)
AK1BA_HUMAN
[Raw transfer]



NAP_A_3(4GQ0)
AK1BA_HUMAN
[Raw transfer]



EDO_B_20(4F40)
PGFS_LEIMA
[Raw transfer]



EDO_B_20(4F40)
PGFS_LEIMA
[Raw transfer]



EDO_A_3(4GAC)
AK1A1_MOUSE
[Raw transfer]



CIT_E_5(1VBJ)
PGFS_TRYBB
[Raw transfer]



GLU_A_3(4FZI)
PGFS_TRYCC
[Raw transfer]



NAP_X_2(4JII)
AK1BA_HUMAN
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]



NAP_A_3(4JIH)
AK1BA_HUMAN
[Raw transfer]



NAP_A_3(4I5X)
AK1BA_HUMAN
[Raw transfer]



GOL_I_9(1MZR)
DKGA_ECOLI
[Raw transfer]



0HV_B_7(4DBS)
AK1C3_HUMAN
[Raw transfer]



GLU_B_4(4FZI)
PGFS_TRYCC
[Raw transfer]



C2U_A_7(3CV7)
AK1A1_PIG
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



GOL_D_12(3O0K)
?
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]



GOL_C_10(3O0K)
?
[Raw transfer]



FLF_A_3(1S2C)
AK1C3_HUMAN
[Raw transfer]



CIT_F_6(1VBJ)
PGFS_TRYBB
[Raw transfer]



BT9_A_4(4DBU)
AK1C3_HUMAN
[Raw transfer]



FLF_A_2(4I5X)
AK1BA_HUMAN
[Raw transfer]



EPR_A_2(4JIH)
AK1BA_HUMAN
[Raw transfer]



A2P_A_2(5JH2)
?
[Raw transfer]



EDO_A_12(4F40)
PGFS_LEIMA
[Raw transfer]



YY1_A_4(4WRH)
AK1C3_HUMAN
[Raw transfer]



EDO_B_19(4F40)
PGFS_LEIMA
[Raw transfer]



NAP_B_2(1AE4)
AK1A1_PIG
[Raw transfer]



NAP_B_2(1CWN)
AK1A1_PIG
[Raw transfer]
6 PsiBlast_PDB 94.8949% -70 - C7 -3D3F - GR_BACSU -
8 PsiBlast_PDB 94.6649% -71 - C7 -3F7J - GR_BACSU -
25 PsiBlast_CBE 93.7949% -76 - C7 -3D3F - GR_BACSU -
24 PsiBlast_CBE 92.8247% -82 - C7 -1VBJ 11.0 PGFS_TRYBB
120 HHSearch 92.5351% -68 - C7 -3F7J - GR_BACSU -
5 PsiBlast_PDB 92.3247% -87 - C7 -1VBJ 12.6 PGFS_TRYBB
129 HHSearch 92.1050% -85 - C7 -3O0K 2.7 ?
114 HHSearch 91.5149% -90 - C7 -1VBJ 12.6 PGFS_TRYBB
130 HHSearch 91.4850% -84 - C7 -3O0K 2.7 ?
116 HHSearch 91.4747% -70 - C7 -4G5D 12.8 PGFS_LEIMA
23 PsiBlast_CBE 91.3846% -90 - C7 -4FZI 2.6 PGFS_TRYCC
4 PsiBlast_PDB 91.1446% -57 - C7 -4GIE - PGFS_TRYCC -
28 PsiBlast_CBE 90.5849% -83 - C7 -3O0K 2.7 ?
27 PsiBlast_CBE 90.5549% -84 - C7 -3O0K 2.7 ?
7 PsiBlast_PDB 90.3249% -81 - C7 -3O0K 2.7 ?
115 HHSearch 90.2647% -76 - C7 -4F40 2.8 PGFS_LEIMA
119 HHSearch 90.1550% -70 - C7 -4Q3M - ? -
9 PsiBlast_PDB 89.7250% -75 - C7 -4Q3M - ? -
121 HHSearch 89.4748% -61 - C7 -4GIE - PGFS_TRYCC -
26 PsiBlast_CBE 89.1449% -80 - C7 -3O0K 2.7 ?
2 PsiBlast_PDB 88.8347% -69 - C7 -4G5D 12.8 PGFS_LEIMA
21 PsiBlast_CBE 88.3947% -68 - C7 -4G5D 13.3 PGFS_LEIMA
3 PsiBlast_PDB 87.7346% -56 - C7 -4FZI 2.6 PGFS_TRYCC
22 PsiBlast_CBE 87.6047% -75 - C7 -4F40 3.4 PGFS_LEIMA
1 PsiBlast_PDB 87.0747% -71 - C7 -4F40 2.5 PGFS_LEIMA
48 PsiBlast_CBE 84.4143% -48 - C7 -1A80 9.9 DKGA_CORSC
14 PsiBlast_PDB 82.6741% -34 - C7 -1MZR 3.0 DKGA_ECOLI
17 PsiBlast_PDB 80.6237% -8 - C7 -3CV7 3.5 AK1A1_PIG
15 PsiBlast_PDB 79.3538% -9 - C7 -4GAC 2.8 AK1A1_MOUSE
52 PsiBlast_CBE 77.0239% 11 - C7 -4JIH 12.2 AK1BA_HUMAN
55 PsiBlast_CBE 76.5839% 15 - C7 -4GQG 12.6 AK1BA_HUMAN
51 PsiBlast_CBE 76.5538% 10 - C7 -4I5X 12.6 AK1BA_HUMAN
50 PsiBlast_CBE 76.3939% 15 - C7 -4GA8 12.7 AK1BA_HUMAN
53 PsiBlast_CBE 76.3539% 12 - C7 -1ZUA 13.2 AK1BA_HUMAN
56 PsiBlast_CBE 76.2239% 11 - C7 -4GQ0 12.7 AK1BA_HUMAN (first)
54 PsiBlast_CBE 75.5239% 11 - C7 -4JII 12.5 AK1BA_HUMAN
49 PsiBlast_CBE 75.3539% 17 - C7 -4GAB 12.8 AK1BA_HUMAN
43 PsiBlast_CBE 73.6537% - - C7 -1CWN 2.8 AK1A1_PIG
20 PsiBlast_PDB 73.6437% - - C7 -1AE4 2.4 AK1A1_PIG
132 HHSearch 71.5839% 15 - C7 -3H7U 12.5 AKRC9_ARATH
103 PsiBlast_CBE 68.9037% 31 - C7 -4WRH 3.4 AK1C3_HUMAN