@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXI4: (2018-01-04 )
MSKILVFGHQNPDTDAIGAAIAFSHLQNELGKETEAVALGTPNEETQYALDHFQLSAPRVVESAKAENADVMLVDHNEFQQSISDISEVNILAVVDHHRIANFETANPLYYRAEPVGCTSTIILKLYKENQVTIPKEIAGIMLSAIISDTLLFKSPTCTPEDEAAAKELAAIAEVDLNTYGLEMLKAGTNLSDKSAAVLLDLDAKSFPMGSSNVRIAQVNTVDLNEVMDRQAELEAAMEDEMKANGYDLFVLVVTNILDSDSELLVAGKGKEKVEEAFQTTLTNNRALLKGVVSRKKQVVPQLTAVFS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

2PN_A_9(2IW4)
PPAC_BACSU
[Raw transfer]



2PN_B_22(2HAW)
PPAC_BACSU
[Raw transfer]



2PN_A_6(2ENX)
PPAC_STRA5
[Raw transfer]



2PN_A_6(2ENX)
PPAC_STRA5
[Raw transfer]



2PN_A_21(2HAW)
PPAC_BACSU
[Raw transfer]



2PN_B_20(2IW4)
PPAC_BACSU
[Raw transfer]



2PN_B_20(2IW4)
PPAC_BACSU
[Raw transfer]



2PN_B_11(2ENX)
PPAC_STRA5
[Raw transfer]



GOL_A_12(1K20)
PPAC_STRGC
[Raw transfer]



GOL_B_11(1K20)
PPAC_STRGC
[Raw transfer]



GOL_B_11(1K20)
PPAC_STRGC
[Raw transfer]
8 PsiBlast_PDB 91.9064%-117 - C3 -1K23 - PPAC_BACSU -
6 PsiBlast_PDB 90.7164% -93 - C3 -2IW4 4.0 PPAC_BACSU
27 HHSearch 90.5264% -90 - C3 -2IW4 4.3 PPAC_BACSU
24 PsiBlast_CBE 90.3264% -93 - C3 -2HAW 4.2 PPAC_BACSU
25 PsiBlast_CBE 90.2864% -93 - C3 -1WPM - PPAC_BACSU -
26 PsiBlast_CBE 90.1664% -90 - C3 -2IW4 4.3 PPAC_BACSU
4 PsiBlast_PDB 90.0764% -93 - C3 -1WPM - PPAC_BACSU -
5 PsiBlast_PDB 89.9064% -94 - C3 -2HAW 4.1 PPAC_BACSU
7 PsiBlast_PDB 79.6162% -1 - C3 -1I74 - PPAC_STRMU -
1 PsiBlast_PDB 77.5361% 18 - C3 -1WPP - PPAC_STRGC -
51 Fugue 77.4762% 22 - C3 -1K20 2.6 PPAC_STRGC
23 PsiBlast_CBE 76.8061% 21 - C3 -1K20 2.5 PPAC_STRGC
3 PsiBlast_PDB 76.7661% 22 - C3 -1K20 - PPAC_STRGC -
2 PsiBlast_PDB 76.7161% 24 - C3 -2ENX 3.3 PPAC_STRA5
40 HHSearch 75.8770%-123 - C3 -1WPN - PPAC_BACSU -
29 HHSearch 75.7661% 21 - C3 -2ENX 3.3 PPAC_STRA5
22 PsiBlast_CBE 75.5161% 22 - C3 -2ENX 3.4 PPAC_STRA5
9 PsiBlast_PDB 74.8169%-117 - C3 -1WPN - PPAC_BACSU -
30 HHSearch 71.9757% 10 - C3 -1K20 2.5 PPAC_STRGC
10 PsiBlast_PDB 64.0138% 10 - C3 -2EB0 - PPAC_METJA -