@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXL7: (2018-01-04 )
MPQKTKNTPMMEQYLSIKAQYQDAFLFYRLGDFYELFYEDAIKASQLLELTLTSRNRNAEEPIPMCGVPHHAAQGYIDALIEKGYKVAICEQVEDPKTTKGMVKREVIQLVTPGTVMDSKGLSAKDNNFLTAVVSQGNEFGFAYADLSTGELKTARLHDEEAVLNEASALQTKELVLGSEITDTLREQLSGRLGLVFSQQNEMEENAEFSFLTSELVDPLEKEATGKLLTYLSVTQKRSLAHIQKAVEYQPDHFLKMDYYSKFNLELSQSIRTGKKHGTLLWLLDETKTAMGGRLLKQWLDRPLIQAKQIKARQEMVASLLDSYFERIDLQSALTKVYDLERLAGRVAFGNVNGRDLIQLKTSLEQVPMIRGLIEGIDQGQWQSLLSEMQPMDHLVQLIDQAIQDDPPLQITEGNIIKDGFNEQLDMYRSAMRNGKKWLAELEAKERQETGIKNLKIGFNRVFGYYIEITKANLGNAELEKYERKQTLANAERFITPELKELETQILEAEEKSVDLEYQLFLAVREEVKKAIQPLQVLAKAISAVDVLQSFATISERYQYVRPELVSDKHQLLIKDGRHPVVEKVLGHQEYIPNSVEMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQMGCFVPAKQAVLPIFDRIFTRIGASDDLIAGQSTFMVEMMEANQALRYATPNSLILFDELGRGTATYDGMALAQAIIEYIHRHVQAKTLFSTHYHELTVLEKELPQLKNVHVGAVEKDGEVVFLHKMMDGPADKSYGIHVAKIAGLPSNLLERAADILHTLENGDNGHHTVPAEVEEKTKTAKQEQIKPPAEKVNQDHIQDRVKEENQQLSLFSELSENETEVIESLKQINLLEMTPMDALNTLYELQKQL

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NACID_E_5(3ZLJ)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBB)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_4(3K0S)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1OH8)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_3(3K0S)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1OH6)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBB)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1W7A)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_4(1E3M)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1OH7)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1OH5)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBD)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_6(3ZLJ)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WBD)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]
-
NACID_E_1(1WB9)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH5)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH7)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH8)
MUTS_ECOLI
[Raw transfer]
-
NACID_F_2(1OH6)
MUTS_ECOLI
[Raw transfer]
-
39 HHSearch 94.5540% -93 - C4 -1EWQ - MUTS_THEAQ -
12 PsiBlast_PDB 86.4339% -19 - C4 -1NNE - MUTS_THEAQ -
13 PsiBlast_PDB 85.6039% -20 - C4 -1FW6 - MUTS_THEAQ -
14 PsiBlast_PDB 84.8039% -18 - C4 -1EWQ - MUTS_THEAQ -
8 PsiBlast_PDB 84.4340% 1 - C4 -3K0S 7.4 MUTS_ECOLI
7 PsiBlast_PDB 84.2340% -3 - C4 -1WBD 8.6 MUTS_ECOLI
10 PsiBlast_PDB 83.9740% -1 - C4 -1WB9 7.5 MUTS_ECOLI
2 PsiBlast_PDB 83.6240% -1 - C4 -1OH6 7.0 MUTS_ECOLI
35 HHSearch 83.4040% 1 - C4 -1WB9 7.6 MUTS_ECOLI
11 PsiBlast_PDB 83.1439% 1 - C4 -1E3M 6.6 MUTS_ECOLI
5 PsiBlast_PDB 83.1440% -3 - C4 -2WTU - MUTS_ECOLI -
29 PsiBlast_CBE 83.1239% -18 * C4 *1NNE - MUTS_THEAQ -
3 PsiBlast_PDB 82.8840% -0 - C4 -1OH7 6.4 MUTS_ECOLI
1 PsiBlast_PDB 82.6140% -1 - C4 -1OH5 5.0 MUTS_ECOLI
9 PsiBlast_PDB 82.4740% 0 - C4 -1WBB 8.4 MUTS_ECOLI
6 PsiBlast_PDB 82.3940% 3 - C4 -3ZLJ 6.1 MUTS_ECOLI
25 PsiBlast_CBE 82.3540% 1 - C4 -1WBD 3.1 MUTS_ECOLI
4 PsiBlast_PDB 82.1840% 2 - C4 -1OH8 7.3 MUTS_ECOLI
20 PsiBlast_CBE 81.9540% 4 - C4 -1W7A 2.3 MUTS_ECOLI
28 PsiBlast_CBE 81.9440% 1 - C4 -1WB9 2.4 MUTS_ECOLI
27 PsiBlast_CBE 81.6940% 1 - C4 -1WBB 3.9 MUTS_ECOLI
22 PsiBlast_CBE 81.5840% 1 - C4 -1OH7 3.7 MUTS_ECOLI
21 PsiBlast_CBE 80.9140% 2 - C4 -1OH8 3.8 MUTS_ECOLI
23 PsiBlast_CBE 80.8640% 3 - C4 -1OH6 3.2 MUTS_ECOLI
24 PsiBlast_CBE 80.7640% 2 - C4 -1OH5 3.5 MUTS_ECOLI
26 PsiBlast_CBE 80.6640% 5 - C4 -3K0S 4.0 MUTS_ECOLI
18 PsiBlast_CBE 78.1840% 12 - C4 -3ZLJ 2.6 MUTS_ECOLI