@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXL8: (2018-01-04 )
MAKIQELSERLANQIAAGEVVERPASVVKELVENAIDAGSTQIDILVEEAGLRTIQVIDNGEGILADDVENAFKRHATSKIHNRDDLFRIRTLGFRGEALPSIASVSEMTLETANQEEKQGTYLSLKGGEVIEHRPAPLRQGTKITVSNLFFNTPARLKYVKTLHTELANIGDIVNRLALSHPSIAFRLVHDGNKMLATAGNGDLKQTIAGIYGLSTAKKMLKIEGKDLDFELFGYVSLPEVTRASRNYLSTIINGRFIKNFSLNKAIVAGYGSKLMVGRFPIAVLEIKMDPLLVDVNVHPTKQEVRLSKEKELTELISNAIQKALSQENLIPSAADNLRFKKKVPDQPKTEQIEIDLSYAFEEEKPKKPSSLNFDRETGTFFVEELKNTFVDRIVDKSVENVENYSGFSEENTTYPEKTAKTVDKFGENVDNFVEKTVEKSEKKEFPIVDNMEKTNEEQADKSVEEDEKIYEEELTLHPEFDFTQGNDKTLEQAIKKLETEKPVQRFPQLEYFGQMHGTYLFAQSSDGLYIIDQHAAQERIKYEYFREKIGEVSDDLQELLVPFVLDYPNSDALKLKEQKHLLEDAGIYLEEFGQNSFIVRAHPTWYPNGEEESIIREMIDMLLTTGSVSVKKFREATAIMMSCKRSIKANHYLNEAQARVLLKDLARCENPFNCPHGRPVLIHFTNSDMERMFKRIQDPH

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]




ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]




ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]




ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]




ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]




ANP_A_5(1B63)
MUTL_ECOLI
[Raw transfer]




ANP_A_4(1NHJ)
MUTL_ECOLI
[Raw transfer]




ANP_A_6(1NHI)
MUTL_ECOLI
[Raw transfer]




ADP_A_3(1B62)
MUTL_ECOLI
[Raw transfer]




SAP_A_4(1H7U)
PMS2_HUMAN
[Raw transfer]




6 PsiBlast_PDB 80.9541% -17 - C2 -1NHJ 10.2 MUTL_ECOLI
7 PsiBlast_PDB 80.9241% -21 - C2 -1B63 10.0 MUTL_ECOLI
34 HHSearch 80.5441% -20 - C2 -1B63 10.0 MUTL_ECOLI
5 PsiBlast_PDB 79.2240% -19 - C2 -1B62 7.5 MUTL_ECOLI
8 PsiBlast_PDB 78.9041% -20 - C2 -1NHI 10.1 MUTL_ECOLI
57 Fugue 75.8242% 32 - C2 -1B63 10.0 MUTL_ECOLI
3 PsiBlast_PDB 71.6240% -77 - C2 -5AKD - MUTL_ECOLI -
4 PsiBlast_PDB 71.0440% -72 - C2 -1BKN - MUTL_ECOLI -
2 PsiBlast_PDB 69.8540% -68 - C2 -5AKC - MUTL_ECOLI -
1 PsiBlast_PDB 69.4340% -69 - C2 -5AKB - MUTL_ECOLI -
9 PsiBlast_PDB 68.5653%-143 - C3 -3GAB - MUTL_BACSU -
11 PsiBlast_PDB 68.5553%-144 - C3 -3KDK - MUTL_BACSU -
36 HHSearch 66.7029% -20 - C2 -1H7S - PMS2_HUMAN -
15 PsiBlast_PDB 64.3026% -21 - C2 -3H4L - PMS1_YEAST -
37 HHSearch 63.4527% -5 - C2 -3H4L - PMS1_YEAST -
14 PsiBlast_PDB 62.7028% -16 - C2 -1H7S - PMS2_HUMAN -
60 Fugue 62.5328% -15 - C2 -1H7S - PMS2_HUMAN -
13 PsiBlast_PDB 56.6729% -17 - C2 -1H7U 4.4 PMS2_HUMAN
12 PsiBlast_PDB 56.6529% -24 - C2 -1EA6 - PMS2_HUMAN -
58 Fugue 55.8445% -15 - C2 -1B63 9.6 MUTL_ECOLI
61 Fugue 47.2846% 40 * C2 *1B63 9.6 MUTL_ECOLI
62 Fugue 44.3932% -40 - C2 -1B63 Error MUTL_ECOLI