@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXR8: (2018-01-05 )
MAELKQEWINTAIEALDKAYVPYSHFPVGACLVTESGKIYQGINIENASFGLTNCAERTAFFKAVSEGEKTFTHLVVAGHTPDPISPCGACRQVMAEFCSPDMPVTLVGDNGVTKATTVRALLPYAFTEKDL

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TYU_B_11(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_D_13(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_D_13(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_C_12(2FR5)
CDD_MOUSE
[Raw transfer]




TYU_A_10(2FR5)
CDD_MOUSE
[Raw transfer]




ZEB_A_3(1CTU)
CDD_ECOLI
[Raw transfer]




THU_B_5(1UWZ)
CDD_BACSU
[Raw transfer]




THU_B_5(1UWZ)
CDD_BACSU
[Raw transfer]




THU_C_10(1UX1)
CDD_BACSU
[Raw transfer]




THU_B_8(1UX1)
CDD_BACSU
[Raw transfer]




THU_D_12(1UX1)
CDD_BACSU
[Raw transfer]




THU_A_5(1JTK)
CDD_BACSU
[Raw transfer]




BRD_A_5(1MQ0)
CDD_HUMAN
[Raw transfer]




BRD_B_6(1MQ0)
CDD_HUMAN
[Raw transfer]




CTN_A_10(2FR6)
CDD_MOUSE
[Raw transfer]




CTN_C_12(2FR6)
CDD_MOUSE
[Raw transfer]




THU_B_5(1UX0)
CDD_BACSU
[Raw transfer]




THU_B_6(1JTK)
CDD_BACSU
[Raw transfer]




THU_A_5(1UX1)
CDD_BACSU
[Raw transfer]




URI_B_11(2FR6)
CDD_MOUSE
[Raw transfer]




CTN_D_13(2FR6)
CDD_MOUSE
[Raw transfer]




THU_B_6(1JTK)
CDD_BACSU
[Raw transfer]




CTD_A_3(1ALN)
?
[Raw transfer]




EDO_B_8(3R2N)
?
[Raw transfer]




MRD_D_13(3DMO)
?
[Raw transfer]




EDO_C_10(3R2N)
?
[Raw transfer]




MRD_B_11(3DMO)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




MRD_C_12(3DMO)
?
[Raw transfer]




MRD_A_10(3DMO)
?
[Raw transfer]




NH3_B_14(2FR6)
CDD_MOUSE
[Raw transfer]




77 HHSearch 93.2756%-120 - C5 -1JTK 3.9 CDD_BACSU
1 PsiBlast_PDB 92.9256%-121 - C5 -1JTK - CDD_BACSU -
76 HHSearch 92.8255%-117 * C5 *1UWZ 3.2 CDD_BACSU
21 PsiBlast_CBE 92.7656%-120 - C5 -1JTK 3.9 CDD_BACSU
23 PsiBlast_CBE 92.2255%-117 - C5 -1UWZ 3.2 CDD_BACSU
22 PsiBlast_CBE 91.9155%-119 - C5 -1UX0 3.6 CDD_BACSU
2 PsiBlast_PDB 91.8855%-119 - C5 -1UX0 - CDD_BACSU -
3 PsiBlast_PDB 91.5555%-118 - C5 -1UWZ - CDD_BACSU -
27 PsiBlast_CBE 91.0154%-119 - C5 -1UX1 4.0 CDD_BACSU
5 PsiBlast_PDB 90.3854%-118 - C5 -1UX1 3.8 CDD_BACSU
26 PsiBlast_CBE 90.1654%-125 - C5 -1UX1 3.9 CDD_BACSU
25 PsiBlast_CBE 89.8254%-117 - C5 -1UX1 3.8 CDD_BACSU
4 PsiBlast_PDB 87.7255%-104 - C5 -2D30 - ? -
28 PsiBlast_CBE 84.4950% -69 - C5 -1MQ0 3.9 CDD_HUMAN
59 Fugue 83.9855% -63 - C5 -1JTK 3.9 CDD_BACSU
80 HHSearch 83.5847% -73 - C5 -2FR5 4.1 CDD_MOUSE
37 PsiBlast_CBE 82.7047% -66 - C5 -2FR5 4.0 CDD_MOUSE
6 PsiBlast_PDB 82.6250% -65 - C5 -1MQ0 3.9 CDD_HUMAN
34 PsiBlast_CBE 82.4547% -65 - C5 -2FR6 4.0 CDD_MOUSE
81 HHSearch 82.3047% -69 - C5 -1ZAB - CDD_MOUSE -
32 PsiBlast_CBE 81.9547% -58 - C5 -2FR6 3.5 CDD_MOUSE
36 PsiBlast_CBE 81.3947% -61 - C5 -2FR5 4.0 CDD_MOUSE
35 PsiBlast_CBE 81.1947% -65 - C5 -2FR5 4.1 CDD_MOUSE
33 PsiBlast_CBE 81.0647% -61 - C5 -2FR6 3.8 CDD_MOUSE
9 PsiBlast_PDB 80.8747% -64 - C5 -2FR5 4.1 CDD_MOUSE
10 PsiBlast_PDB 80.8447% -63 - C5 -2FR6 3.7 CDD_MOUSE
69 HHSearch 76.7449% -47 - C5 -3DMO 3.3 ?
31 PsiBlast_CBE 67.1051% -40 - C5 -3DMO 2.9 ?
30 PsiBlast_CBE 66.7451% -38 - C5 -3DMO 3.1 ?
29 PsiBlast_CBE 65.9751% -40 - C5 -3DMO 3.1 ?
7 PsiBlast_PDB 65.8251% -41 - C5 -3DMO 3.2 ?