@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXT0: (2018-01-05 )
MNNFDIFRFKPFINEALTAKGFKQPTEVQERLIPLIAKGKNIIGQSQTGTGKTHTFLLPLFEKINAEKEEVQVVITAPSRELAAQIYEAATQIAKFSTPEIRVSNFVGGTDKQRQLNRLHHQQPQVVVGTPGRILDMMNEQALKIHTAFAFVVDEADMTLDMGFLNEVDQIASRLPEKLQFLVFSATIPEKLRPFLRKYMENPIIEEIKPKAVISEDIENWLISTKGKDENQMIYQLLTIGHPYLAIVFANTKQHVDEIADYLKNQGLKVAKIHGDITPRERKRVMRQVQNLEYQYVVATDLAARGIDIEGVSHVINAEIPEDLDFFIHRVGRTGRNGLKGTAITLYSPNDEQAIDAIEKLGVSFEPKEIKNGEIVKTYDRNRRAKREKSKDVLDPTLIGLVKKKKKKIKPGYKKKIDWAIAEKNKKERKIERRQQSRTARKNKKNSHK

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_12(3FHT)
DD19B_HUMAN
[Raw transfer]



ADP_A_3(3PEW)
DBP5_YEAST
[Raw transfer]



ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]



ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]



ADP_A_3(4D26)
?
[Raw transfer]



M2A_A_3(5ELX)
DBP5_YEAST
[Raw transfer]



ANP_A_7(2J0S)
IF4A3_HUMAN
[Raw transfer]



ANP_A_3(4D25)
?
[Raw transfer]



8OP_C_10(3NBF)
?
[Raw transfer]



ANP_A_2(5E7M)
DDX3X_HUMAN
[Raw transfer]



8OX_B_6(3MWL)
?
[Raw transfer]



ADP_B_5(4PX9)
DDX3X_HUMAN
[Raw transfer]



ADP_A_4(4PX9)
DDX3X_HUMAN
[Raw transfer]



ADP_C_6(4PX9)
DDX3X_HUMAN
[Raw transfer]



8OP_B_6(3MWK)
?
[Raw transfer]



8OD_A_5(3NBF)
?
[Raw transfer]



AMP_A_5(2VSX)
IF4A_YEAST
[Raw transfer]



AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]



AMP_A_5(2VSO)
IF4A_YEAST
[Raw transfer]



AMP_A_2(5E7J)
DDX3X_HUMAN
[Raw transfer]



EOH_A_4(2PL3)
DDX10_HUMAN
[Raw transfer]
1 PsiBlast_PDB 80.0138%-109 - C3 -5IVL - ? -
101 HHSearch 79.2738%-109 - C3 -5IVL - ? -
111 HHSearch 78.7429%-141 - C3 -4CT4 - DDX6_HUMAN -
113 HHSearch 77.6330%-135 - C3 -1S2M - DHH1_YEAST -
22 PsiBlast_CBE 76.4532% -65 - C3 -3EX7 - IF4A3_HUMAN -
25 PsiBlast_CBE 76.0232% -62 - C3 -2J0Q - IF4A3_HUMAN -
6 PsiBlast_PDB 75.8432% -62 - C3 -2J0Q - IF4A3_HUMAN -
7 PsiBlast_PDB 75.7432% -64 - C3 -2J0S 8.3 IF4A3_HUMAN
24 PsiBlast_CBE 75.7332% -64 - C3 -2XB2 - IF4A3_HUMAN -
4 PsiBlast_PDB 75.6432% -67 - C3 -3EX7 - IF4A3_HUMAN -
5 PsiBlast_PDB 75.5432% -64 - C3 -2XB2 - IF4A3_HUMAN -
23 PsiBlast_CBE 75.1032% -64 - C3 -2HYI - IF4A3_HUMAN -
3 PsiBlast_PDB 74.4132% -67 - C3 -2HYI - IF4A3_HUMAN -
17 PsiBlast_PDB 73.5530% -69 - C3 -1XTK - DX39B_HUMAN -
116 HHSearch 71.5131% -84 - C3 -2J0U - IF4A3_HUMAN -
11 PsiBlast_PDB 70.9437% 1 - C3 -4KBF - ? -
9 PsiBlast_PDB 70.5731% -68 - C3 -2J0U - IF4A3_HUMAN -
120 HHSearch 70.1532% 3 - C3 -2I4I - DDX3X_HUMAN -
8 PsiBlast_PDB 70.1432% -75 - C3 -2HXY - IF4A3_HUMAN -
36 PsiBlast_CBE 69.6733% -74 - C3 -2VSX 5.0 IF4A_YEAST
108 HHSearch 69.4831% 2 - C3 -4D25 8.2 ?
38 PsiBlast_CBE 69.3533% -79 - C3 -2VSO 5.2 IF4A_YEAST
42 PsiBlast_CBE 67.7031% 1 - C3 -3FHT 9.3 DD19B_HUMAN
41 PsiBlast_CBE 67.0431% 2 - C3 -3FHT 9.9 DD19B_HUMAN
18 PsiBlast_PDB 66.9133% 31 - C3 -3PEW 8.4 DBP5_YEAST
44 PsiBlast_CBE 65.7931% -1 - C3 -3G0H 8.3 DD19B_HUMAN
33 PsiBlast_CBE 65.7232% 13 - C3 -2I4I 3.8 DDX3X_HUMAN
32 PsiBlast_CBE 63.2132% 12 - C3 -5E7J 4.4 DDX3X_HUMAN
31 PsiBlast_CBE 61.1132% 7 - C3 -5E7M 4.3 DDX3X_HUMAN
74 PsiBlast_CBE 43.6331% -19 - C3 -4PX9 5.2 DDX3X_HUMAN
72 PsiBlast_CBE 43.0531% -19 - C3 -4PX9 4.6 DDX3X_HUMAN
73 PsiBlast_CBE 42.7631% -17 - C3 -4PX9 5.0 DDX3X_HUMAN
70 PsiBlast_CBE 36.3332% 16 - C3 -2PL3 3.1 DDX10_HUMAN