@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXT5: (2018-01-05 )
MSSKELTMYLEKELDQLKEKGLYNTIDILESENGACIIVDGKKMINLASNNYLGFANREELKKACIEATETYGVGAGAVRTINGSLKIHQQLEEKIAEFKGTEAAIAFQSGFNCNMGAISAVMTKEDAILSDELNHASIIDGCRLSGAKIIRIKHQDMKDLEKKAKEAIESKKYKKIMYITDGVFSMDGDIARLPEIIPIVEKYGLITYVDDAHGSGVTGKGAGTVKHFGLSDKIDMQMGTLSKAIGVVGGYVAGSKTLIDWLKARSRPFLFSTSLTPGAAAAALASITLMQEHPELVEKVWENANYFKEELKKVGYNIGMSETPITPVILGDEKVTQTFSKKLIEHGIYAKPIVYPTVPLGTGRIRNMPTAEHTREMLDEAVAVYQKIGKEMEII

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PLS_A_2(2W8J)
?
[Raw transfer]



PLP_B_4(3TQX)
?
[Raw transfer]



KAM_A_5(1DJ9)
BIOF_ECOLI
[Raw transfer]



PLS_A_2(2W8W)
?
[Raw transfer]



PMP_A_2(2XBN)
?
[Raw transfer]



PLP_A_3(3TQX)
?
[Raw transfer]



PLP_A_5(1DJE)
BIOF_ECOLI
[Raw transfer]



PLP_A_5(1DJE)
BIOF_ECOLI
[Raw transfer]



PLP_A_3(3A2B)
?
[Raw transfer]



PLP_A_3(3A2B)
?
[Raw transfer]



LLF_A_3(2G6W)
BIOF_ECOLI
[Raw transfer]



MYB_A_4(4BMK)
?
[Raw transfer]



MYB_B_8(4BMK)
?
[Raw transfer]



AKB_B_4(1FC4)
KBL_ECOLI
[Raw transfer]



AKB_A_3(1FC4)
KBL_ECOLI
[Raw transfer]



BEN_A_4(5VNX)
BIOF_BURM1
[Raw transfer]



BEN_C_14(5VNX)
BIOF_BURM1
[Raw transfer]



BEN_A_4(5VNX)
BIOF_BURM1
[Raw transfer]



BEN_C_14(5VNX)
BIOF_BURM1
[Raw transfer]



BEN_B_10(5VNX)
BIOF_BURM1
[Raw transfer]
73 HHSearch 90.7341% -50 - C1 -3A2B 3.4 ?
59 HHSearch 90.4942% -43 * C1 *3TQX 3.4 ?
1 PsiBlast_PDB 90.4340% -49 - C1 -3A2B 3.4 ?
2 PsiBlast_PDB 90.3741% -44 - C1 -3TQX 4.0 ?
67 HHSearch 89.4140% -5 - C1 -1FC4 5.2 KBL_ECOLI
3 PsiBlast_PDB 88.8939% -9 - C1 -1FC4 5.3 KBL_ECOLI
66 HHSearch 83.0232% -48 - C1 -1BS0 - BIOF_ECOLI -
7 PsiBlast_PDB 82.6334% -5 - C1 -5JAY - BIOF_PARXL -
50 Fugue 82.3831% -46 - C1 -1BS0 - BIOF_ECOLI -
69 HHSearch 81.9033% -14 - C1 -5VNX 3.6 BIOF_BURM1
49 Fugue 81.8434% 11 - C1 -2BWN - HEM1_RHOCB -
68 HHSearch 81.1833% -13 - C1 -5VNX 2.5 BIOF_BURM1
60 HHSearch 80.5234% 12 - C1 -2BWN - HEM1_RHOCB -
61 HHSearch 80.2834% 11 - C1 -2BWO - HEM1_RHOCB -
19 PsiBlast_PDB 80.1533% -52 - C1 -2G6W 3.9 BIOF_ECOLI
65 HHSearch 79.9731% -55 - C1 -1DJE 4.8 BIOF_ECOLI
6 PsiBlast_PDB 79.8536% 6 - C1 -2BWN - HEM1_RHOCB -
18 PsiBlast_PDB 79.6733% -51 - C1 -1BS0 - BIOF_ECOLI -
22 PsiBlast_CBE 79.4736% 4 - C1 -2BWP - HEM1_RHOCB -
24 PsiBlast_CBE 79.2736% 7 - C1 -2BWO - HEM1_RHOCB -
12 PsiBlast_PDB 79.2432% -65 - C1 -2XBN 4.0 ?
31 PsiBlast_CBE 77.8832% -57 - C1 -1DJE 4.8 BIOF_ECOLI
20 PsiBlast_PDB 77.8632% -52 - C1 -1DJ9 4.6 BIOF_ECOLI
26 PsiBlast_CBE 77.4932% -65 - C1 -4BMK 1.9 ?
33 PsiBlast_CBE 75.7432% -7 - C1 -5VNX 3.7 BIOF_BURM1
32 PsiBlast_CBE 75.1332% -7 - C1 -5VNX 3.6 BIOF_BURM1
34 PsiBlast_CBE 74.6332% -6 - C1 -5VNX 2.5 BIOF_BURM1