@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXU7: (2018-01-06 )
MSIFRKLGWFFRQEKKHYLIGVFSLFAVALVQLVPPKVIGIIIDEIADKNLSVKIIFGWIFLLIIAAFLQYLFRYIWRTNIWGSAARLEKELRQQLFKHFTEMDNLFYQKYRTGDLMAHATNDLNAIQNVAGAGILTFADSVITGGTTIIAMILFIDWRLTLIALIPLPLLAVTSRVLGSKLHDAFRDSQEAFSSINDKTQESITGIKVIKTFGQEKEDLADFEEKIEDAIIKNKRVNFLDSLFDPFITLIIGLSYVATIILGGKYVLEGTISIGQMVSFISYIGMLVWPMFAIGRLFNVLERGNASYDRVNELLHEKTHIVEQLGAVQTPAKGELNVAISSFNYPKEESPALEQIKFAIQEGETLGIVGKTGAGKTTIIKLLMREYDDYQGKIQFGGRSIKEYSLNALLGSIGYVPQDHFLFSMTIRDNIRFSNPKLSEEEVEHAASLAFINNEIKELPKGYDTLVGERGVSLSGGQKQRISIARALIKNPELLILDDALSAVDAKTEEAILHNLKEIRKEKTTIISAHRLSSVMHAKQIIVVDQGKIIERGTHHELLALGGWYEQMWEKQQLEAKIEGGEA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2ONJ)
Y1866_STAAM
[Raw transfer]




ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]




ATP_D_5(3VX4)
?
[Raw transfer]




ADP_A_5(2HYD)
Y1866_STAAM
[Raw transfer]




ADP_B_6(2HYD)
Y1866_STAAM
[Raw transfer]




AGS_A_3(4S0F)
?
[Raw transfer]




ATP_A_3(3VX4)
?
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




94 HHSearch 83.2930%-132 - C2 -3QF4 - Y288_THEMA -
87 HHSearch 80.7233% -65 - C2 -5MKK - ? -
22 PsiBlast_CBE 74.5231% -30 - C2 -2HYD 4.4 Y1866_STAAM
5 PsiBlast_PDB 74.4732%-121 - C2 -3QF4 - Y288_THEMA -
95 HHSearch 74.2530% - - C2 -4Q4H - Y288_THEMA -
21 PsiBlast_CBE 74.1231% -29 - C2 -2ONJ 6.0 Y1866_STAAM
2 PsiBlast_PDB 74.1231% -30 - C2 -2ONJ 5.8 Y1866_STAAM
1 PsiBlast_PDB 74.0431% -29 - C2 -2HYD 4.5 Y1866_STAAM
6 PsiBlast_PDB 73.7532%-117 - C2 -4Q4A - Y288_THEMA -
92 HHSearch 72.9528% -7 - C2 -5MKK - ? -
3 PsiBlast_PDB 72.8231% -29 - C2 -4A82 - Y1866_STAAM -
8 PsiBlast_PDB 71.4832%-118 - C2 -4Q4J - Y288_THEMA -
86 HHSearch 70.2931% -15 - C2 -4A82 - Y1866_STAAM -
82 HHSearch 69.7929% -73 - C2 -3B60 - MSBA_SALTY -
88 HHSearch 69.6728% - - C2 -3B5X - MSBA_VIBCH -
20 PsiBlast_PDB 69.5228% -9 - C2 -4AYX - ABCBA_HUMAN -
73 Fugue 69.4728% -74 - C2 -3B60 - MSBA_SALTY -
97 HHSearch 68.2726% -21 - C2 -4MRP - ATM1_NOVAD -
19 PsiBlast_PDB 68.1928% -9 - C2 -4AYT - ABCBA_HUMAN -
96 HHSearch 67.7926% -22 - C2 -4MRS - ATM1_NOVAD -
18 PsiBlast_PDB 61.5530% -14 - C2 -4S0F 3.9 ?
54 PsiBlast_CBE 45.9440% -61 - C2 -3VX4 4.8 ?
55 PsiBlast_CBE 45.0040% -56 - C2 -3VX4 5.2 ?