@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXY7: (2018-01-06 )
MKQNFAIVGLGRFGGSICRTLIEAGQEVLAIDSNEDRVNEYMNIATHAVVANAQDEMTLRSLGIRNFDHVIVAIGEDIQASILVTLMVKEMGVPNILAKAQNEYHARVLEKIGADRVVHPERDMGIRIAHNLVSKNILDYLELSDKYSLAEIRVSNPKFFNKTLAELNFRQRFDLTVVAIRRVDQTVIASPAADEYVRENDNLLVIGETGDVDILDDKMNQ

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




NAI_C_3(1LSU)
KTRA_BACSU
[Raw transfer]




ADP_A_5(4J91)
KTRA_BACSU
[Raw transfer]




NAI_J_10(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




ADP_D_8(4J91)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMT)
KTRA_BACSU
[Raw transfer]




NAI_J_10(2HMS)
KTRA_BACSU
[Raw transfer]




ATP_A_3(4J90)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




ADP_D_8(4J91)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




NAI_M_13(2HMT)
KTRA_BACSU
[Raw transfer]




ADP_I_9(2HMV)
KTRA_BACSU
[Raw transfer]




ADP_M_13(2HMV)
KTRA_BACSU
[Raw transfer]




26 PsiBlast_CBE 92.4651%-163 - C2 -4J7C - KTRA_BACSU -
29 PsiBlast_CBE 92.4251%-161 - C2 -4J7C - KTRA_BACSU -
28 PsiBlast_CBE 92.3951%-165 - C2 -4J7C - KTRA_BACSU -
22 PsiBlast_CBE 92.2851%-178 - C2 -4J91 Error KTRA_BACSU
27 PsiBlast_CBE 92.0951%-159 - C2 -4J7C - KTRA_BACSU -
31 PsiBlast_CBE 92.0051%-160 - C2 -4J7C - KTRA_BACSU -
25 PsiBlast_CBE 91.8351%-161 - C2 -4J7C - KTRA_BACSU -
62 HHSearch 91.6350%-155 - C2 -4J7C - KTRA_BACSU -
30 PsiBlast_CBE 91.4751%-158 - C2 -4J7C - KTRA_BACSU -
3 PsiBlast_PDB 91.3651%-164 - C2 -4J7C - KTRA_BACSU -
24 PsiBlast_CBE 91.2551%-161 - C2 -4J90 7.5 KTRA_BACSU
1 PsiBlast_PDB 91.1551%-158 - C2 -4J90 Error KTRA_BACSU
23 PsiBlast_CBE 90.6851%-175 - C2 -4J91 6.1 KTRA_BACSU
21 PsiBlast_CBE 90.6051%-178 - C2 -4J91 6.4 KTRA_BACSU
2 PsiBlast_PDB 89.0151%-189 - C2 -4J91 Error KTRA_BACSU
63 HHSearch 88.7951%-183 - C2 -4J91 Error KTRA_BACSU
4 PsiBlast_PDB 82.8861%-188 - C2 -2HMS Error KTRA_BACSU
37 PsiBlast_CBE 82.1961%-186 - C2 -2HMS Error KTRA_BACSU
34 PsiBlast_CBE 81.6361%-189 - C2 -2HMU 5.8 KTRA_BACSU
5 PsiBlast_PDB 81.3861%-184 - C2 -2HMT 6.2 KTRA_BACSU
7 PsiBlast_PDB 81.3061%-184 - C2 -2HMV 5.4 KTRA_BACSU
32 PsiBlast_CBE 81.0061%-183 - C2 -2HMW 5.7 KTRA_BACSU
35 PsiBlast_CBE 80.3061%-184 - C2 -2HMT 5.4 KTRA_BACSU
33 PsiBlast_CBE 80.0561%-189 - C2 -2HMV 5.9 KTRA_BACSU
8 PsiBlast_PDB 79.9961%-187 - C2 -2HMW Error KTRA_BACSU
6 PsiBlast_PDB 79.9461%-182 - C2 -2HMU Error KTRA_BACSU
36 PsiBlast_CBE 79.1461%-182 - C2 -2HMS 6.0 KTRA_BACSU
38 PsiBlast_CBE 78.9061%-181 - C2 -2HMS 5.8 KTRA_BACSU
84 Fugue 78.8461%-181 - C2 -1LSU Error KTRA_BACSU
9 PsiBlast_PDB 78.8461%-181 - C2 -1LSU Error KTRA_BACSU
39 PsiBlast_CBE 77.8461%-176 - C2 -1LSU 7.1 KTRA_BACSU