@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XXZ2: (2018-01-06 )
MLTVHVDNQKYDIHIEKGALEQAGSWLQTIWRPQKVAVITDTNVAPLYAEKIMFQLRQANFEPVLSIVPAGETSKSLEQAAELYDFLADNDFTRSDGILALGGGMVGDLAAFVASTFMRGIHFVQIPTTLLAQVDSSIGGKTAVNTNKAKNLVGTFSQPAGVLIDPEVLKTLPVRRLREGIAEIIKSAAIADATLWKQLNELKDEKDLLEHAVPIITATLEIKRKVVEEDVFDQGNRLILNFGHTIGHAIENTAGYGVVSHGEGVAIGMVAITSHAEKIGLSPTGSTAALERILQKFHLPITYDLSHPDELFHAITHDKKARGSQLNIILLEKIGQAKIVPVPTETFKDYLGGL

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]



NAD_A_8(1XAG)
AROB_STAAR
[Raw transfer]



NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]



NAD_A_3(3OKF)
AROB_VIBCH
[Raw transfer]



NAD_B_12(3OKF)
AROB_VIBCH
[Raw transfer]



NAD_A_19(1NRX)
ARO1_EMENI
[Raw transfer]



NAD_A_8(1XAG)
AROB_STAAR
[Raw transfer]



NAD_A_6(1DQS)
ARO1_EMENI
[Raw transfer]



NAD_A_3(5EKS)
?
[Raw transfer]



NAD_A_8(1NR5)
ARO1_EMENI
[Raw transfer]



NAD_B_5(5EKS)
?
[Raw transfer]



NAD_A_2(5HVN)
AROB_FRATT
[Raw transfer]



NAD_B_20(1NRX)
ARO1_EMENI
[Raw transfer]



NAD_A_3(5EKS)
?
[Raw transfer]



NAD_A_2(5HVN)
AROB_FRATT
[Raw transfer]



NAD_B_8(1DQS)
ARO1_EMENI
[Raw transfer]



NAD_A_5(1SG6)
ARO1_EMENI
[Raw transfer]



NAD_B_9(1NR5)
ARO1_EMENI
[Raw transfer]



NAD_A_7(1NVB)
ARO1_EMENI
[Raw transfer]



NAD_B_6(1SG6)
ARO1_EMENI
[Raw transfer]



NAI_A_3(4P53)
VALA_STRHJ
[Raw transfer]



NAD_B_6(1SG6)
ARO1_EMENI
[Raw transfer]



NAD_B_6(1XAH)
AROB_STAAR
[Raw transfer]



ADP_C_13(1NVF)
ARO1_EMENI
[Raw transfer]



ADP_B_12(1NVF)
ARO1_EMENI
[Raw transfer]



ADP_A_11(1NVF)
ARO1_EMENI
[Raw transfer]



ADP_B_7(1NVA)
ARO1_EMENI
[Raw transfer]



ADP_A_6(1NVA)
ARO1_EMENI
[Raw transfer]



CRB_A_6(1NVD)
ARO1_EMENI
[Raw transfer]



CRB_B_9(1NVB)
ARO1_EMENI
[Raw transfer]



CRB_B_7(1NVD)
ARO1_EMENI
[Raw transfer]



CRB_B_6(1XAI)
AROB_STAAR
[Raw transfer]



CAK_B_11(2GRU)
DOIS_BACCI
[Raw transfer]



CRB_A_5(1XAI)
AROB_STAAR
[Raw transfer]



CRB_B_9(1NVB)
ARO1_EMENI
[Raw transfer]



EXO_A_9(2GRU)
DOIS_BACCI
[Raw transfer]
50 HHSearch 95.7837% -86 - C4 -3OKF 9.4 AROB_VIBCH
47 HHSearch 94.9637% -81 - C4 -5EKS 9.0 ?
2 PsiBlast_PDB 92.7538% -83 - C4 -3OKF 9.4 AROB_VIBCH
49 HHSearch 92.0237% -87 - C4 -3OKF 8.9 AROB_VIBCH
52 HHSearch 86.5535% -45 - C4 -5HVN 8.8 AROB_FRATT
21 PsiBlast_CBE 84.0439% -24 - C4 -5EKS 8.5 ?
44 HHSearch 83.6331% -77 - C4 -1XAG 7.8 AROB_STAAR
46 HHSearch 82.8234% -26 - C4 -3ZOK - DHQS_ACTCH -
1 PsiBlast_PDB 82.7039% -23 - C4 -5EKS 9.0 ?
41 HHSearch 82.4331% -69 * C4 *3QBE - AROB_MYCTU -
36 PsiBlast_CBE 80.9832% -86 - C4 -1XAI 4.4 AROB_STAAR
15 PsiBlast_PDB 80.6632% -86 - C4 -1XAI 4.6 AROB_STAAR
14 PsiBlast_PDB 80.5532% -82 - C4 -1XAG 7.8 AROB_STAAR
55 HHSearch 80.4236% 5 - C4 -1NVB 4.7 ARO1_EMENI
42 HHSearch 80.3826% -72 - C4 -2GRU - DOIS_BACCI -
45 HHSearch 80.0931% -91 - C4 -1XAH 9.1 AROB_STAAR
64 Fugue 78.7335% -2 - C4 -1DQS 10.3 ARO1_EMENI
24 PsiBlast_CBE 78.1837% -33 - C4 -3ZOK - DHQS_ACTCH -
23 PsiBlast_CBE 78.0337% -34 - C4 -3ZOK - DHQS_ACTCH -
22 PsiBlast_CBE 77.3937% -34 - C4 -3ZOK - DHQS_ACTCH -
56 HHSearch 77.3036% -8 - C4 -1SG6 9.0 ARO1_EMENI
29 PsiBlast_CBE 74.3337% -2 - C4 -1NVD 5.2 ARO1_EMENI
4 PsiBlast_PDB 74.1138% -48 - C4 -5HVN 8.8 AROB_FRATT
11 PsiBlast_PDB 73.3137% 4 - C4 -1NVD 5.4 ARO1_EMENI
26 PsiBlast_CBE 73.0737% 6 - C4 -1NVF 4.1 ARO1_EMENI
10 PsiBlast_PDB 72.7837% 3 - C4 -1NVB 6.8 ARO1_EMENI
5 PsiBlast_PDB 72.7737% 3 - C4 -1DQS 10.3 ARO1_EMENI
34 PsiBlast_CBE 72.3237% 5 - C4 -1NR5 9.6 ARO1_EMENI
30 PsiBlast_CBE 72.2437% 3 - C4 -1NVB 4.7 ARO1_EMENI
6 PsiBlast_PDB 72.2137% 7 - C4 -1NR5 10.3 ARO1_EMENI
35 PsiBlast_CBE 72.1537% 4 - C4 -1DQS 10.2 ARO1_EMENI
27 PsiBlast_CBE 71.7737% 9 - C4 -1NVF 4.4 ARO1_EMENI
12 PsiBlast_PDB 71.2837% 9 - C4 -1NVF 4.6 ARO1_EMENI
31 PsiBlast_CBE 71.2537% -2 - C4 -1NVA 3.8 ARO1_EMENI
25 PsiBlast_CBE 71.1337% -17 - C4 -1SG6 9.0 ARO1_EMENI
33 PsiBlast_CBE 70.5037% -12 - C4 -1NRX 6.1 ARO1_EMENI
13 PsiBlast_PDB 70.3937% -8 - C4 -1SG6 9.6 ARO1_EMENI
7 PsiBlast_PDB 70.3437% -12 - C4 -1NRX 5.8 ARO1_EMENI
9 PsiBlast_PDB 69.0437% -9 - C4 -1NVA 3.7 ARO1_EMENI