@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XY18: (2018-01-07 )
MSFQRPKGTNDILPGESEKWQFVEETARLLFRDYQYNEMRTPIFEHYEVISRSVGDTTDIVSKEMYDFYDKGERHVTLRPEGTAPIVRSFVEHKLFGPEYAKPFKTFYMGPMFRYERPQKGRLRQFHQIGVEAFGSENPATDVESMVMALDFFKQLGITQIRLVINSLGDKETRQAYRQALIDYLLPFESELSEDSKRRLHENPLRVLDSKDKRDQKFVAEAPSILDYLSEPAQKHFDTVVSMLDALAVPYEIDSNMVRGLDYYTHTIFEIMSDAPKMGAQATICAGGRYDNLVEELGGPSTPGFGFAMGIERLLLTMEAEEVVIPAFNELDAYVVALGDETNIEALKVVQAIRNFGFSADRDFMNRKAKAQFKTADKANAKLVLVIGEDELASQTINVKAMASRKEKSFPLEEIYEHFDEVYDEMTLFE

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_B_7(5E3I)
SYH_ACIBS
[Raw transfer]



ATP_B_7(5E3I)
SYH_ACIBS
[Raw transfer]



ATP_A_4(5E3I)
SYH_ACIBS
[Raw transfer]



AMP_A_3(4RDX)
SYH_THET2
[Raw transfer]



HIS_A_3(4E51)
SYH_BURTA
[Raw transfer]



HIS_A_3(4E51)
SYH_BURTA
[Raw transfer]



HIS_B_4(4E51)
SYH_BURTA
[Raw transfer]



HIS_B_4(4E51)
SYH_BURTA
[Raw transfer]



LMR_A_2(3RAC)
?
[Raw transfer]
43 HHSearch 90.2047% -65 - C2 -1QE0 - SYH_STAAU -
1 PsiBlast_PDB 90.1346% -71 - C2 -1QE0 - SYH_STAAU -
48 HHSearch 86.2943% -10 - C2 -4E51 3.3 SYH_BURTA
41 HHSearch 84.5442% -20 - C2 -1ADJ - SYH_THET8 -
47 HHSearch 83.0043% -16 - C2 -4E51 2.9 SYH_BURTA
35 PsiBlast_CBE 82.6241% -17 - C2 -1ADY - SYH_THET8 -
42 HHSearch 82.4942% -20 - C2 -1H4V - SYH_THET2 -
34 PsiBlast_CBE 82.4741% -16 - C2 -1ADY - SYH_THET8 -
37 PsiBlast_CBE 82.3941% -23 - C2 -1ADJ - SYH_THET8 -
36 PsiBlast_CBE 82.2741% -16 - C2 -1ADY - SYH_THET8 -
8 PsiBlast_PDB 82.2441% -15 - C2 -1ADY - SYH_THET8 -
7 PsiBlast_PDB 82.2241% -21 - C2 -1ADJ - SYH_THET8 -
45 HHSearch 81.7942% -32 - C2 -1KMM - SYH_ECOLI -
38 PsiBlast_CBE 81.4641% -21 - C2 -1ADJ - SYH_THET8 -
39 PsiBlast_CBE 80.6541% -20 - C2 -1ADJ - SYH_THET8 -
5 PsiBlast_PDB 80.2443% 15 - C2 -4E51 3.3 SYH_BURTA
44 HHSearch 80.0342% -32 * C2 *1KMN - SYH_ECOLI -
46 HHSearch 79.9842% -5 - C2 -5E3I 7.8 SYH_ACIBS
21 PsiBlast_CBE 79.6841% -33 - C2 -1HTT - SYH_ECOLI -
24 PsiBlast_CBE 79.3541% -41 - C2 -1KMN - SYH_ECOLI -
30 PsiBlast_CBE 78.4943% 0 - C2 -4E51 2.9 SYH_BURTA
10 PsiBlast_PDB 77.7541% -16 - C2 -4RDX 6.7 SYH_THET2
40 PsiBlast_CBE 75.4741% -2 - C2 -5E3I 7.8 SYH_ACIBS
11 PsiBlast_PDB 73.1141% 4 - C2 -5E3I 8.3 SYH_ACIBS