@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XY71: (2018-01-07 )
MEELFTERAQAVLEIAQEEAKRLKHQSVSSEHVLLALVVEQNGIAGKVLREMDLNETEIYEEIEHLIGYGGIRSYPKGVFLPYSPRMKQVFALASSEVKKTGSQKVGTEHILMSLLKDESIMATRIMINLGISLSKARQVLKQKMGLAGDSAGKGMNRRRNVNVQDKRQTPQGTPTLDSLARDLTKLAKENKLDPVVGRSREVKRLIQILSRRTKNNPVLVGEPGVGKTAIAEGLAQKIILGEVPEDMQEKRLMMLDMGSLVAGTKYRGEFEDRMKKVIDEIYNDGQVILFIDELHTLIGAGGAEGAIDASNILKPALARGELQTIGATTLDEYQKYIEKDSALERRFARIQVDEPTPEEAEVILQGLRTRYEEHHGVEITDEAVRAAVNLSVRYITSRQLPDKAIDLIDESAAKVRLDQTDHLTKSTVIKLEIDELVQEKEAAIQKQDFENAAQLRRQEKALRKKLQKVSAIEAKQEQGYSDRVTEEDVATVVSEWTGVPLQQLEKKESERLLELEGLLHERVVGQDEAVKAVSRAIRRARSGLKDPDRPIGSFMFLGPTGVGKTELAKALSEVMFGSEDALIRVDMSEFMEKYSTSRLIGSPPGYVGYDEGGQLTEKIRQKPYSVILLDEVEKAHPDVFNLLLQVLDDGHLTDSKGRKVDFRNTIMIMTSNIGATQIREEKNVGFNVQDVTKDHKAMQKRILEELKKAFRPEFLNRIDETVVFHSLSKDEIHTIVQIMSKAIIKRLKEQDIQVKITPSAIDVIGKAGFDPEYGARPIRRALQKEIEDRLSEALLGGEIRLGDHVTVGASKGKITLNVRGPKKETVGSL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



ACP_A_2(4LJ9)

[Raw transfer]



MNT_C_8(4LJ7)

[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_2(4LJ5)

[Raw transfer]



MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]



ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]



ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]



ADP_D_6(4FD2)

[Raw transfer]



ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]
97 Fugue 85.8046% 0 - C- -1QVR - CLPB_THET8 -
71 HHSearch 78.8860% 4 - C1 -3J3U - CLPC_BACSU -
4 PsiBlast_PDB 75.1260% 33 - C1 -3J3U - CLPC_BACSU -
3 PsiBlast_PDB 74.5060% 37 * C1 *3J3R - CLPC_BACSU -
1 PsiBlast_PDB 74.4860% 41 - C1 -3J3S - CLPC_BACSU -
72 HHSearch 73.9958% - - C1 -3PXI - CLPC_BACSU -
2 PsiBlast_PDB 72.9160% 37 - C1 -3J3T - CLPC_BACSU -
5 PsiBlast_PDB 72.2555% - - C1 -3PXI - CLPC_BACSU -
25 PsiBlast_CBE 64.3055%-146 - C1 -4LJ7 6.9 CLPB_THET8
24 PsiBlast_CBE 63.2055%-151 - C1 -4LJ7 8.3
11 PsiBlast_PDB 62.7555%-137 - C1 -4LJ5 6.7
12 PsiBlast_PDB 62.6655%-143 - C1 -4LJ7 9.4 CLPB_THET8
78 HHSearch 61.5258%-137 - C1 -4FCV 6.8 CLPB_THET8
10 PsiBlast_PDB 61.3155%-134 - C1 -4LJ4 - -
17 PsiBlast_PDB 61.0554%-144 - C1 -4FCW 7.6 CLPB_THET8
75 HHSearch 60.9556%-121 - C1 -4LJ9 6.7
27 PsiBlast_CBE 60.8655%-144 - C1 -4FD2 6.3 CLPB_THET8
13 PsiBlast_PDB 60.6555%-123 - C1 -4LJ9 6.7
15 PsiBlast_PDB 60.5555%-145 - C1 -4FD2 6.7 CLPB_THET8
26 PsiBlast_CBE 60.3855%-145 - C1 -4FD2 6.3
16 PsiBlast_PDB 60.3754%-137 - C1 -4FCV 6.8 CLPB_THET8
14 PsiBlast_PDB 59.4155%-132 - C1 -4LJA 7.2