@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYJ8: (2018-01-09 )
MSNWETKFTKKGFTFDDVLLIPAESHVLPNEVDMSVQLAKNIKLNIPIISASMDTVTDSKMAIAMARQGGLGVIHKNMTISQQADEVRKVKRSESGVIIDPFFLTPQHLVADAEELMSKYRISGVPIVETLENRKLVGIITNRDMRFVTDYHMPIADVMTKDNLVTAPVGTSLKDAEKILQKHKIEKLPIVDNEGRLSGLITIKDIEKVIEFPNAAKDEHGRLLVAAAVGVTSDTFERANALLEAGADAIIIDTAHGHSAGVIRKIQEIRSTFADATLIAGNVATAEATKALYDAGVDVVKVGIGPGSICTTRVVAGVGVPQLTAIYDAASVARQYGKAIIADGGIKYSGDIVKALAAGGHAVMLGSMLAGTDESPGEFEIFQGRRFKTYRGMGSLGAMEKGSKDRYFQGSVNEANKLVPEGIEGRVAYKGSVADIIFQMIGGLRSGMGYVGAANLQQLRDEAQFIQMSGSGLKESHPHDVQITKEAPNYSVES

Atome Classification :

(50 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_4(4X3Z)
?
[Raw transfer]




NAD_A_4(4X3Z)
?
[Raw transfer]




NAD_B_8(4X3Z)
?
[Raw transfer]




NAJ_A_4(4QNE)
?
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




IMP_A_2(1ZFJ)
IMDH_STRPY
[Raw transfer]




IMP_B_6(4FO4)
?
[Raw transfer]




NAJ_B_7(4QNE)
?
[Raw transfer]




IMP_A_3(5AHM)
?
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_A_3(4FO4)
?
[Raw transfer]




IMP_A_2(4FXS)
?
[Raw transfer]




IMP_C_8(4IX2)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




IMP_B_6(4IX2)
?
[Raw transfer]




IMP_D_11(4IX2)
?
[Raw transfer]




XMP_A_2(5UPX)
?
[Raw transfer]




IMP_A_5(4IX2)
?
[Raw transfer]




XMP_A_3(2CU0)
IMDH_PYRHO
[Raw transfer]




XMP_A_2(5UPX)
?
[Raw transfer]




RVP_A_4(1ME8)
IMDH_TRIFO
[Raw transfer]




FMT_B_10(4FEZ)
?
[Raw transfer]




XMP_A_2(4QQ3)
?
[Raw transfer]




CPR_B_4(1B3O)
IMDH2_HUMAN
[Raw transfer]




Q21_B_18(4MY8)
?
[Raw transfer]




FMT_B_12(4FEZ)
?
[Raw transfer]




XMP_A_3(3TSD)
?
[Raw transfer]




Q21_B_13(4MY8)
?
[Raw transfer]




Q21_A_6(4MY8)
?
[Raw transfer]




CPR_B_13(1NFB)
IMDH2_HUMAN
[Raw transfer]




CPR_A_9(1NFB)
IMDH2_HUMAN
[Raw transfer]




Q21_A_3(5UPY)
?
[Raw transfer]




2EY_B_8(4MYA)
?
[Raw transfer]




2EY_A_4(4MYA)
?
[Raw transfer]




IMP_A_3(3USB)
?
[Raw transfer]




2F1_C_20(4MZ1)
?
[Raw transfer]




39H_A_6(4QM1)
?
[Raw transfer]




CPR_A_3(1B3O)
IMDH2_HUMAN
[Raw transfer]




39H_C_9(4QM1)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




IMP_A_2(5AHN)
?
[Raw transfer]




CPR_A_3(1B3O)
IMDH2_HUMAN
[Raw transfer]




39H_B_8(4QM1)
?
[Raw transfer]




39H_C_10(4QM1)
?
[Raw transfer]




1 PsiBlast_PDB 88.2977% -94 - C2 -1ZFJ 5.1 IMDH_STRPY
2 PsiBlast_PDB 86.7272% -81 - C2 -3TSB - ? -
3 PsiBlast_PDB 84.8072%-103 - C2 -3TSD 6.0 ?
4 PsiBlast_PDB 83.7769%-111 - C2 -3USB 4.9 ?
114 HHSearch 83.1581% -56 - C2 -1ZFJ 5.1 IMDH_STRPY
6 PsiBlast_PDB 77.1255% -54 - C2 -4FXS 5.1 ?
123 HHSearch 75.6673% -89 - C2 -5UPX 6.8 ?
116 HHSearch 74.3457% -23 - C2 -4FXS 5.1 ?
129 HHSearch 73.9156%-101 - C2 -5UQG - ? -
124 HHSearch 73.4460%-105 - C2 -5UZC - ? -
9 PsiBlast_PDB 72.8954% -59 - C2 -4DQW - ? -
134 HHSearch 72.7556% -95 - C2 -4MZ1 4.8 ?
125 HHSearch 72.2860%-101 - C2 -5UZS - ? -
133 HHSearch 71.9261% -95 - C2 -4X3Z 5.7 ?
132 HHSearch 71.5961% -94 - C2 -4FO4 6.5 ?
128 HHSearch 71.2560%-101 - C2 -4FEZ 3.3 ?
21 PsiBlast_CBE 71.0154% -64 - C2 -4DQW - ? -
119 HHSearch 70.1251% -88 - C2 -2CU0 6.7 IMDH_PYRHO
126 HHSearch 70.0557% -96 - C2 -5AHM 6.7 ?
135 HHSearch 69.8356% -90 - C2 -4QJ1 - ? -
113 HHSearch 69.7754%-114 - C2 -5AHN 4.9 ?
10 PsiBlast_PDB 69.7754%-114 - C2 -5AHN 4.9 ?
12 PsiBlast_PDB 68.1261% -80 - C2 -5UPX 4.1 ?
93 PsiBlast_CBE 63.3742%-120 - C2 -1B3O 3.4 IMDH2_HUMAN
13 PsiBlast_PDB 62.5677%-111 - C2 -5UPY 5.2 ?
15 PsiBlast_PDB 60.2971%-106 - C2 -4MY8 5.6 ?
70 PsiBlast_CBE 60.1271%-109 - C2 -4MYA 5.2 ?
62 PsiBlast_CBE 59.3471%-108 - C2 -4QM1 5.2 ?
80 PsiBlast_CBE 59.2471%-109 - C2 -4MY8 5.5 ?
79 PsiBlast_CBE 58.9871%-111 - C2 -4MY8 5.4 ?
17 PsiBlast_PDB 58.1971% -93 - C2 -4MYA 5.1 ?
20 PsiBlast_PDB 58.0471%-110 - C2 -4QM1 4.7 ?
61 PsiBlast_CBE 57.9171%-112 - C2 -4QM1 5.0 ?
94 PsiBlast_CBE 57.4763% -95 - C2 -4X3Z 5.0 ?
104 PsiBlast_CBE 56.9063% -96 - C2 -4FO4 6.0 ?
60 PsiBlast_CBE 56.9071%-109 - C2 -4QM1 5.0 ?
99 PsiBlast_CBE 56.8863%-101 - C2 -4IX2 5.6 ?
103 PsiBlast_CBE 56.7763% -96 - C2 -4FO4 6.3 ?
95 PsiBlast_CBE 55.9263% -93 - C2 -4X3Z 5.6 ?
100 PsiBlast_CBE 55.8863% -97 - C2 -4IX2 6.1 ?
102 PsiBlast_CBE 55.7363% -99 - C2 -4IX2 5.2 ?
101 PsiBlast_CBE 55.6563% -97 - C2 -4IX2 4.3 ?
89 PsiBlast_CBE 55.1342% -42 - C2 -1NFB 5.2 IMDH2_HUMAN
88 PsiBlast_CBE 55.0142% -41 - C2 -1NFB 7.2 IMDH2_HUMAN
98 PsiBlast_CBE 54.9363% -91 - C2 -4QNE 5.8 ?
97 PsiBlast_CBE 54.2363% -95 - C2 -4QNE 5.2 ?
11 PsiBlast_PDB 54.1850% 14 - C2 -2CU0 6.7 IMDH_PYRHO
96 PsiBlast_CBE 54.0263%-119 - C2 -4QQ3 6.9 ?
92 PsiBlast_CBE 53.6942% -20 - C2 -1B3O 5.8 IMDH2_HUMAN
137 Fugue 47.3641% -1 - C2 -1B3O 3.4 IMDH2_HUMAN