@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYR7: (2018-01-10 )
MNGMELSKRTKRLEPSVTLAAAAKAKALKAKGRDVLSLTVGEPDFATPENIQEAAIEAIRNGKASYYTPTAGIPELRQAIVDYLKKNYGLVYEPSQTVVTDGAKFALYTLFQTILDPQDEVIIPVPYWVSYGEQVKLAEGLPVFVKGEESNSWKVTVEQLEQARSEKTKAVIINSPSNPTGMIYSKNELQAIGEWAVKNDILIVADDIYGRLVYNGNEFTPIATISEAIKNQTIIINGVSKTYAMTGWRIGYAVGNPVIINGMIAVASQSTSNPTAVSQYAAVEALKGEQDTVEEMRNAFEERLNTLYPLVAELPGVSLEKPQGAFYLFPNVKETLRMCKYENVTQWVEDLLEETGVALVTGEGFGAPENVRMSYATDRATLEEAVRRIKQFIESKSQN

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_D_4(1GCK)
AAT_THET8
[Raw transfer]



PLP_E_5(1GDE)
?
[Raw transfer]



GOL_A_8(3E2Y)
KAT3_MOUSE
[Raw transfer]



GLU_D_4(1GDE)
?
[Raw transfer]



PLP_E_5(1GDE)
?
[Raw transfer]



PLP_F_6(1GDE)
?
[Raw transfer]



GLU_C_3(1GDE)
?
[Raw transfer]



PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]



PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]



PLP_B_4(1GD9)
?
[Raw transfer]



PLP_F_6(1GCK)
AAT_THET8
[Raw transfer]



PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]



PLP_A_3(1GD9)
?
[Raw transfer]



PLP_B_4(1DJU)
?
[Raw transfer]



ASP_C_3(1GCK)
AAT_THET8
[Raw transfer]



PLP_E_5(1GCK)
AAT_THET8
[Raw transfer]



PLP_A_5(1B5O)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]



PLP_A_5(1B5P)
AAT_THET8
[Raw transfer]



PLP_B_4(1J32)
?
[Raw transfer]



GLN_B_6(3E2Y)
KAT3_MOUSE
[Raw transfer]



PLP_B_6(5BJ4)
AAT_THET8
[Raw transfer]



PLP_B_4(1J32)
?
[Raw transfer]



PLP_B_6(1B5O)
AAT_THET8
[Raw transfer]



PLP_A_3(1DJU)
?
[Raw transfer]
1 PsiBlast_PDB 95.3540%-100 - C1 -1J32 - ? -
21 PsiBlast_CBE 95.1340% -99 - C1 -1J32 5.3 ?
53 HHSearch 93.1241% -67 - C1 -1J32 5.3 ?
66 HHSearch 92.2442%-103 - C1 -1O4S 4.5 AAT_THEMA
43 PsiBlast_CBE 89.3740% -81 - C1 -1O4S 4.5 AAT_THEMA
11 PsiBlast_PDB 87.2940% -78 - C1 -1O4S 4.8 AAT_THEMA
32 PsiBlast_CBE 87.0840% -60 - C1 -1GC4 - AAT_THET8 -
24 PsiBlast_CBE 87.0241% -57 - C1 -1BKG - AAT_THET8 -
31 PsiBlast_CBE 86.7740% -61 - C1 -1GC4 - AAT_THET8 -
2 PsiBlast_PDB 86.7741% -58 - C1 -1BKG - AAT_THET8 -
22 PsiBlast_CBE 86.6941% -57 - C1 -1BKG - AAT_THET8 -
8 PsiBlast_PDB 86.6940% -60 - C1 -1GC4 - AAT_THET8 -
65 HHSearch 86.5742% -58 * C1 *1B5P 4.8 AAT_THET8
3 PsiBlast_PDB 86.1941% -60 - C1 -1B5O 4.9 AAT_THET8
30 PsiBlast_CBE 85.9640% -61 - C1 -1GC4 - AAT_THET8 -
23 PsiBlast_CBE 85.9241% -58 - C1 -1BKG - AAT_THET8 -
4 PsiBlast_PDB 85.6741% -59 - C1 -1BJW - AAT_THET8 -
36 PsiBlast_CBE 85.6040% -63 - C1 -1GC3 - AAT_THET8 -
35 PsiBlast_CBE 85.4940% -62 - C1 -1GC3 - AAT_THET8 -
33 PsiBlast_CBE 85.2940% -63 - C1 -1GC3 - AAT_THET8 -
27 PsiBlast_CBE 85.0940% -56 - C1 -1B5P 4.8 AAT_THET8
25 PsiBlast_CBE 84.6141% -59 - C1 -1B5O 5.3 AAT_THET8
6 PsiBlast_PDB 84.0840% -57 - C1 -1B5P 4.8 AAT_THET8
5 PsiBlast_PDB 83.4640% -57 - C1 -1GCK 5.5 AAT_THET8
26 PsiBlast_CBE 82.4440% -54 - C1 -1GCK 6.5 AAT_THET8
29 PsiBlast_CBE 81.0340% -58 - C1 -5BJ4 5.1 AAT_THET8
59 HHSearch 80.8738% -26 - C1 -1GDE 4.1 ?
44 PsiBlast_CBE 75.6437% -35 - C1 -1DJU 3.9 ?
12 PsiBlast_PDB 74.6637% -33 - C1 -1DJU 3.6 ?
13 PsiBlast_PDB 70.9937% 27 - C1 -1GDE 4.1 ?
45 PsiBlast_CBE 70.6837% 25 - C1 -1GDE 4.2 ?
46 PsiBlast_CBE 69.6937% 27 - C1 -1GD9 3.8 ?
14 PsiBlast_PDB 69.5037% 27 - C1 -1GD9 3.7 ?