@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYU5: (2018-01-10 )
MKRALFPGSFDPFTKGHLDTVERAAKLFDEVVIGVFINTSKKSLFPPEERMTLITKAVSHLPNVKVMHQENQLTVETAKEIGADALIRGIRSIKDFEYEREIAQMNHHLYDELETVFLLAKPEYSHVSSSILKEVLHFGGDVSSYLPPVINEALAGKRESNES

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_B_16(3X1M)
?
[Raw transfer]




ATP_B_8(3ND6)
COAD_ENTFA
[Raw transfer]




ATP_C_9(3ND6)
COAD_ENTFA
[Raw transfer]




ATP_D_10(3ND6)
COAD_ENTFA
[Raw transfer]




ATP_F_12(3ND6)
COAD_ENTFA
[Raw transfer]




ATP_A_7(3ND6)
COAD_ENTFA
[Raw transfer]




ATP_E_11(3ND6)
COAD_ENTFA
[Raw transfer]




AGS_B_10(4NAH)
COAD_STAAW
[Raw transfer]




AGS_E_15(4NAH)
COAD_STAAW
[Raw transfer]




ADP_C_11(4NAT)
COAD_STAAW
[Raw transfer]




ADP_B_9(4NAT)
COAD_STAAW
[Raw transfer]




ADP_A_6(4NAT)
COAD_STAAW
[Raw transfer]




PNS_B_8(1VLH)
COAD_THEMA
[Raw transfer]




PNS_B_8(1H1T)
COAD_ECOLI
[Raw transfer]




FMT_A_2(3L93)
COAD_YERPE
[Raw transfer]




PNY_C_9(3ND7)
COAD_ENTFA
[Raw transfer]




PNY_A_7(3ND7)
COAD_ENTFA
[Raw transfer]




9FE_C_8(5O0B)
?
[Raw transfer]




FMT_D_23(3X1K)
?
[Raw transfer]




9FH_A_4(5O0A)
?
[Raw transfer]




PNY_D_10(3ND7)
COAD_ENTFA
[Raw transfer]




PNY_F_12(3ND7)
COAD_ENTFA
[Raw transfer]




9FE_B_7(5O0B)
?
[Raw transfer]




9FE_A_5(5O0B)
?
[Raw transfer]




9FE_C_9(5O0B)
?
[Raw transfer]




9FH_C_6(5O0A)
?
[Raw transfer]




9FH_B_5(5O0A)
?
[Raw transfer]




PNY_B_8(3ND7)
COAD_ENTFA
[Raw transfer]




PNY_E_11(3ND7)
COAD_ENTFA
[Raw transfer]




EDO_C_5(5O06)
?
[Raw transfer]




EDO_B_4(5O06)
?
[Raw transfer]




DMS_A_11(4RUK)
?
[Raw transfer]




25 PsiBlast_CBE 92.0366%-130 - C1 -3ND7 3.1 COAD_ENTFA
23 PsiBlast_CBE 89.9066%-126 - C1 -3ND7 3.4 COAD_ENTFA
22 PsiBlast_CBE 89.4666%-132 - C1 -3ND7 3.1 COAD_ENTFA
1 PsiBlast_PDB 88.7666%-133 - C1 -3ND5 - COAD_ENTFA -
28 PsiBlast_CBE 87.8166%-129 - C1 -3ND6 5.9 COAD_ENTFA
21 PsiBlast_CBE 87.5266%-138 - C1 -3ND7 3.2 COAD_ENTFA
30 PsiBlast_CBE 87.4266%-133 - C1 -3ND6 6.3 COAD_ENTFA
27 PsiBlast_CBE 87.3966%-128 - C1 -3ND6 5.8 COAD_ENTFA
123 HHSearch 87.2066%-124 - C1 -3ND6 - COAD_ENTFA -
122 HHSearch 87.0566%-123 - C1 -3ND7 - COAD_ENTFA -
26 PsiBlast_CBE 86.9666%-125 - C1 -3ND6 5.6 COAD_ENTFA
29 PsiBlast_CBE 86.7666%-125 - C1 -3ND6 5.7 COAD_ENTFA
2 PsiBlast_PDB 86.3566%-126 - C1 -3ND6 5.9 COAD_ENTFA
3 PsiBlast_PDB 86.1866%-129 - C1 -3ND7 2.5 COAD_ENTFA
24 PsiBlast_CBE 86.1266%-125 - C1 -3ND7 3.1 COAD_ENTFA
130 HHSearch 82.7546%-133 * C1 *1GN8 - COAD_ECOLI -
40 PsiBlast_CBE 81.5746%-136 - C1 -1H1T 3.1 COAD_ECOLI
41 PsiBlast_CBE 81.5146%-135 - C1 -1GN8 - COAD_ECOLI -
112 Fugue 81.4445%-137 - C1 -1B6T - COAD_ECOLI -
9 PsiBlast_PDB 81.2546%-138 - C1 -1B6T - COAD_ECOLI -
16 PsiBlast_PDB 79.2345%-133 - C1 -5O0A 4.0 ?
17 PsiBlast_PDB 77.8745%-134 - C1 -5O0B 3.0 ?
104 PsiBlast_CBE 77.1642%-134 - C1 -4RUK 3.5 ?
110 PsiBlast_CBE 77.0942%-133 - C1 -3X1K 2.8 ?
5 PsiBlast_PDB 76.9346%-139 - C1 -4NAT 4.3 COAD_STAAW
36 PsiBlast_CBE 76.4346%-124 - C1 -4NAH 6.3 COAD_STAAW
33 PsiBlast_CBE 76.1346%-133 - C1 -4NAT 4.4 COAD_STAAW
105 PsiBlast_CBE 75.7242%-130 - C1 -3X1M Error ?
54 PsiBlast_CBE 75.4545%-135 - C1 -5O0B 5.5 ?
61 PsiBlast_CBE 74.7145%-127 - C1 -5O06 3.5 ?
34 PsiBlast_CBE 74.3546%-132 - C1 -4NAT 3.5 COAD_STAAW
57 PsiBlast_CBE 73.7645%-134 - C1 -5O0A 4.2 ?
55 PsiBlast_CBE 73.0645%-134 - C1 -5O0B 2.5 ?
56 PsiBlast_CBE 71.7845%-139 - C1 -5O0A 3.8 ?
60 PsiBlast_CBE 71.7245%-126 - C1 -5O06 3.5 ?