@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYV0: (2018-01-10 )
MKKVLVANRGEIAVRVFRACTELGIKTVGIYAEEDEYSVHRFKADEAYLVGQGKKPIDAYLDIEGIISIAKECGADAIHPGYGLLSENLNFAQRCEEEGIIFVGPKLHHLDIFGDKIKAKAAAIEAGIASIPGTDGPIASIDDALEFAKQYGYPIMIKAALGGGGRGMRVAHDEKSAREGYERAKSEAKAAFGSDEVYVEKYIANPKHIEVQILGDTHGNVIHLFERDCSVQRRHQKVVEVAPCVSMNEQQRQKICQAAVQLMKYVGYVNAGTVEFLVEGDDFYFIEVNPRVQVEHTITEMITDIDIVTTQLLIAQGLDLHKEIGLPQQEGIKLNGSAIQCRITTEDPLNNFLPDTGKIDTYRSPGGFGVRLDVGNAYAGYVVTPYFDSLLVKVCTHGATFETAIQKMERCLKEFRIRGVKTNIPFMLNVITHPEFQSGNAKTTFIDSTATLFEFPRLRDRGNKTMKYIGEITVNGFPGIESGEKPFYEEPRMPKDLITRTDYVTAKNVLDAKGADALVEWIKGQENLLLTDTTFRDAHQSLLATRVRTKDFKQIARLTGEGLPELFSSEMWGGATFDVAYRFLNEDPWQRLRKIRSLMPNTLLQMLFRGSNAVGYSNYPDNVLVEFVKEAAAQGIDVFRIFDSLNWTPQMEKSIQAVRDTGKIAEAAICYTGDINDPSRAKYNVQYYKDMAKELEQLGAHIIAIKDMAGLLKPQAAYRLISELKETTDLPIHLHTHDTSGNGIITYSAASKAGVDIVDVAMSAMSGNTSQPSMSSLYYALVNGPRLPEITIENAQKLNHYWEDVRMYYKPFENGLNAPETEVYMHEMPGGQYSNLQQQAKAVGLGHRWDEIKQMYHTVNLMFGDIVKVTPSSKVVGDMALFMVQNDLTEEDIYEKGETLSFPESVVTFFQGELGQPVGGFPKKLQKIILKGRPALNERPGLLAESVDFNEVKKELAEKIGYEPKQDEVLSYLMYPQVFLDYQKAYNQFGDVTLLDTPTFFQGIRLGETINVQIERGKTLIIRLDEIGEPDIEGNRVLFFNLNGQRREITIKDNSIISTVQTRLKAEPTNREQIGATMSGSVLDVLVKKGDNVKKGDTLMITEAMKMETAIEARFDGEVAHVYVSSGDTISSGDLLIEVTEK

Atome Classification :

(64 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ADP_B_4(3G8D)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_8(2J9G)
ACCC_ECOLI
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




ADP_A_3(4MV1)
ACCC_HAEIN
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




L22_B_5(2W70)
ACCC_ECOLI
[Raw transfer]




L22_A_3(2W70)
ACCC_ECOLI
[Raw transfer]




OA5_A_3(2W6Q)
ACCC_ECOLI
[Raw transfer]




OA4_A_3(2W6P)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




OA5_B_5(2W6Q)
ACCC_ECOLI
[Raw transfer]




LZJ_A_3(2V58)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




L21_A_3(2W6Z)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(4RZQ)
ACCC_HAEIN
[Raw transfer]




OA2_A_3(2W6N)
ACCC_ECOLI
[Raw transfer]




JZK_B_4(3JZF)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




OA1_B_5(2W6M)
ACCC_ECOLI
[Raw transfer]




OA3_C_5(2W6O)
ACCC_ECOLI
[Raw transfer]




OA1_A_3(2W6M)
ACCC_ECOLI
[Raw transfer]




OA3_A_3(2W6O)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




33 PsiBlast_CBE 67.0059% -7 - C3 -3HB9 - ? -
28 PsiBlast_CBE 66.3959% -6 - C3 -3HO8 - ? -
29 PsiBlast_CBE 66.0859% -5 - C3 -3HO8 - ? -
5 PsiBlast_PDB 66.0459% -7 - C3 -3HO8 - ? -
30 PsiBlast_CBE 65.6559% -7 - C3 -4HNU - ? -
42 PsiBlast_CBE 65.4859% -8 - C3 -4HNT - ? -
44 PsiBlast_CBE 64.9759% -5 - C3 -4HNT - ? -
1 PsiBlast_PDB 64.4269% -16 - C3 -4QSK - ? -
22 PsiBlast_CBE 64.0369% -16 - C3 -4QSH - ? -
23 PsiBlast_CBE 63.9769% -16 - C3 -4QSH - ? -
21 PsiBlast_CBE 63.8369% -17 - C3 -4QSK - ? -
3 PsiBlast_PDB 63.7969% -16 - C3 -4QSH - ? -
2 PsiBlast_PDB 63.1169% -17 - C3 -4QSL - ? -
125 HHSearch 62.8369% -1 - C3 -4QSH - ? -
4 PsiBlast_PDB 61.4359% -8 - C3 -3BG5 - ? -
27 PsiBlast_CBE 61.3059% -8 - C3 -3HO8 - ? -
7 PsiBlast_PDB 61.0259% -7 - C3 -3HB9 - ? -
34 PsiBlast_CBE 60.9259% -8 - C3 -3HB9 - ? -
124 HHSearch 60.8559% -8 - C3 -3HB9 - ? -
123 HHSearch 60.7459% -14 - C3 -3HBL - ? -
20 PsiBlast_PDB 46.8147% -99 - C3 -4RZQ 3.1 ACCC_HAEIN
48 PsiBlast_CBE 45.6847% -51 - C3 -2VPQ 6.0 ?
14 PsiBlast_PDB 45.5447% -49 - C3 -2VPQ 5.8 ?
49 PsiBlast_CBE 43.6945% -30 - C3 -3JZI 9.3 ACCC_ECOLI
51 PsiBlast_CBE 43.3445% -26 - C3 -3JZF 9.6 ACCC_ECOLI
79 PsiBlast_CBE 43.0245% -27 - C3 -2V58 5.5 ACCC_ECOLI
73 PsiBlast_CBE 42.9745% -33 - C3 -2VR1 4.6 ACCC_ECOLI
62 PsiBlast_CBE 42.9545% -29 - C3 -2W6Z 4.8 ACCC_ECOLI
60 PsiBlast_CBE 42.9545% -28 - C3 -2W70 4.6 ACCC_ECOLI
77 PsiBlast_CBE 42.8745% -28 - C3 -2V59 4.6 ACCC_ECOLI
65 PsiBlast_CBE 42.5445% -28 - C3 -2W6P 5.1 ACCC_ECOLI
69 PsiBlast_CBE 42.5145% -28 - C3 -2W6N 5.2 ACCC_ECOLI
64 PsiBlast_CBE 42.4545% -30 - C3 -2W6Q 4.4 ACCC_ECOLI
70 PsiBlast_CBE 42.3745% -30 - C3 -2W6M 3.9 ACCC_ECOLI
75 PsiBlast_CBE 42.3345% -29 - C3 -2V5A 6.3 ACCC_ECOLI
57 PsiBlast_CBE 42.3145% -28 - C3 -2W71 6.8 ACCC_ECOLI
68 PsiBlast_CBE 42.3045% -29 - C3 -2W6N 5.4 ACCC_ECOLI
87 PsiBlast_CBE 42.2845% -30 - C3 -3RUP 8.3 ACCC_ECOLI
71 PsiBlast_CBE 42.2745% -27 - C3 -2W6M 3.9 ACCC_ECOLI
50 PsiBlast_CBE 42.2745% -30 - C3 -3JZI 8.6 ACCC_ECOLI
67 PsiBlast_CBE 42.2445% -32 - C3 -2W6O 3.9 ACCC_ECOLI
86 PsiBlast_CBE 42.2245% -33 - C3 -3RUP 6.8 ACCC_ECOLI
58 PsiBlast_CBE 42.1645% -29 - C3 -2W71 6.2 ACCC_ECOLI
85 PsiBlast_CBE 42.0945% -32 - C3 -3RV3 8.2 ACCC_ECOLI
92 PsiBlast_CBE 42.0445% -28 - C3 -3RV4 7.4 ACCC_ECOLI
63 PsiBlast_CBE 42.0245% -28 - C3 -2W6Q 4.7 ACCC_ECOLI
78 PsiBlast_CBE 41.9745% -30 - C3 -2V58 5.8 ACCC_ECOLI
17 PsiBlast_PDB 41.8647% -27 - C3 -4MV4 4.0 ACCC_HAEIN
59 PsiBlast_CBE 41.7145% -30 - C3 -2W70 4.8 ACCC_ECOLI
88 PsiBlast_CBE 41.6446% -28 - C3 -3G8C 6.5 ACCC_ECOLI
93 PsiBlast_CBE 41.6045% -33 - C3 -3G8D 5.5 ACCC_ECOLI
81 PsiBlast_CBE 41.4145% -29 - C3 -2J9G 5.9 ACCC_ECOLI
76 PsiBlast_CBE 41.3145% -27 - C3 -2V59 5.6 ACCC_ECOLI
66 PsiBlast_CBE 41.2345% -26 - C3 -2W6O 3.8 ACCC_ECOLI
91 PsiBlast_CBE 41.0845% -29 - C3 -1DV2 5.8 ACCC_ECOLI
16 PsiBlast_PDB 41.0747% -28 - C3 -4MV3 4.8 ACCC_HAEIN
84 PsiBlast_CBE 41.0645% -29 - C3 -3RV3 6.3 ACCC_ECOLI
90 PsiBlast_CBE 40.9945% -25 - C3 -1DV2 4.4 ACCC_ECOLI
95 PsiBlast_CBE 40.7445% -30 - C3 -2VQD 7.3 ACCC_PSEAE
15 PsiBlast_PDB 40.5347% -30 - C3 -4MV1 4.8 ACCC_HAEIN
89 PsiBlast_CBE 40.2546% -30 - C3 -3G8C 6.1 ACCC_ECOLI
80 PsiBlast_CBE 39.7945% -34 - C3 -2J9G 7.4 ACCC_ECOLI
18 PsiBlast_PDB 39.7547% -30 - C3 -4MV8 5.7 ACCC_HAEIN
111 PsiBlast_CBE 35.6537% -48 - C3 -3VA7 2.1 ?