@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYW0: (2018-01-11 )
MDIRFEQVDFTYQPNTPFEQRALFDINMTIKENSYTALVGHTGSGKSTLLQHLNALVKPTSGTVHIGERDIQPDTDNKNLKPIRKKVGIVFQFPEAQLFEETVAKDIAFGPKNFGVSEEEALVLAKETLEQVGLDESYLERSPFELSGGQMRRVAIAGVLAMRPEVLVLDEPTAGLDPQGRKEMMEMFWRLHKEQQITIVLVTHLMDDVANFADYVYVLEKGRIVNSGEPQEVFQNIEWLKEKQLGVPTATEFAEELMAKGMNFATLPLTAEELADAIVHYAGGNAHDE

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]



ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]



ATP_J_5(4YMU)
?
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ADP_B_9(4HLU)
ECFA2_THEMA
[Raw transfer]



ANP_A_6(4ZIR)
ECFA2_THEMA
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



12D_A_2(3B5J)

[Raw transfer]



ADP_A_5(4HLU)
ECFA2_THEMA
[Raw transfer]



ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]



LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]
145 HHSearch 83.4761% - - C1 -4HZU - ECFA2_LACBA -
146 HHSearch 83.2961% - - C1 -4HUQ - ECFA2_LACBA -
2 PsiBlast_PDB 81.1662% - - C1 -4HZU - ECFA2_LACBA -
1 PsiBlast_PDB 80.9762% - - C1 -4HUQ - ECFA2_LACBA -
3 PsiBlast_PDB 80.9362% - - C1 -4RFS - ECFA2_LACBA -
5 PsiBlast_PDB 80.7152% -98 - C1 -5JSZ - ECFA2_LACDA -
4 PsiBlast_PDB 78.0952%-105 - C1 -5D3M - ECFA2_LACDA -
21 PsiBlast_CBE 77.9552%-102 - C1 -5D3M - ECFA2_LACDA -
150 HHSearch 76.8349%-111 - C1 -4MKI - ECFA2_CALS4 -
6 PsiBlast_PDB 69.8048% -28 - C1 -4MKI 3.9 ECFA2_CALS4
22 PsiBlast_CBE 68.2848% -26 - C1 -4MKI 3.0 ECFA2_CALS4
7 PsiBlast_PDB 66.8539%-132 - C1 -3GFO - ECFA3_CLOP1 -
26 PsiBlast_CBE 65.2836%-110 - C1 -5X40 6.3 CBIO_RHOCB
156 HHSearch 64.6036%-121 - C1 -5X40 - CBIO_RHOCB -
13 PsiBlast_PDB 63.6236%-105 - C1 -5X40 6.2 CBIO_RHOCB
154 HHSearch 62.9837%-116 - C1 -5X3X - CBIO_RHOCB -
11 PsiBlast_PDB 61.3237%-105 - C1 -5X3X - CBIO_RHOCB -
166 Fugue 59.7625%-129 - C1 -3TUZ - METN_ECOLI -
80 PsiBlast_CBE 59.2231%-142 - C1 -3TUI - METN_ECOLI -
79 PsiBlast_CBE 57.9931%-141 - C1 -3TUZ - METN_ECOLI -
9 PsiBlast_PDB 49.3739% -64 - C1 -4HLU 5.7 ECFA2_THEMA
25 PsiBlast_CBE 49.2239% -63 - C1 -4HLU 6.4 ECFA2_THEMA
18 PsiBlast_PDB 45.9537% -9 - C1 -4YMU 4.7 ?
10 PsiBlast_PDB 45.6839% -62 - C1 -4ZIR 6.1 ECFA2_THEMA
60 PsiBlast_CBE 45.6536% -17 - C1 -3C41 3.6 ?
30 PsiBlast_CBE 45.0737% -9 - C1 -4YMU 4.1 ?
61 PsiBlast_CBE 44.7936% -10 - C1 -3C41 4.6 ?
59 PsiBlast_CBE 44.7736% -20 - C1 -3TIF 4.5 Y796_METJA
19 PsiBlast_PDB 43.7737% -9 - C1 -4YMV 4.8 ?
55 PsiBlast_CBE 43.7036% -23 - C1 -1L2T 4.2 Y796_METJA
29 PsiBlast_CBE 43.3537% -5 - C1 -4YMV 3.4 ?
54 PsiBlast_CBE 41.5836% -26 - C1 -1L2T 4.3 Y796_METJA
58 PsiBlast_CBE 39.0836% -21 - C1 -3TIF 4.5 Y796_METJA
115 PsiBlast_CBE 32.1835% 31 - C1 -1B0U 3.8 HISP_SALTY