@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XYW1: (2018-01-11 )
MEPIIELEKINYKYQPDDLRPALKDVSFTIDKGEWIAIIGHNGSGKSTLAKTINGLLLPESGIVKVGNQILDEENIWTIRQMVGMVFQNPDNQFVGSTVEDDVAFGLENQGIPREEMLVRVKDALEKVRMAEFASREPARLSGGQKQRVAIAGVVALRPDIIILDEATSMLDPEGREEVISTIKKIKEESQLTVISITHDIDEAANANRILVMRQGELVREGTPKEIFSAGPELIDLGLDLPFPEKLKSALKERGVDVPSEYMTEERMVDWLWTSVLNK

Atome Classification :

(33 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMV)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




1 PsiBlast_PDB 86.7757% - - C1 -4HUQ - ECFA1_LACBA -
3 PsiBlast_PDB 86.5457% - - C1 -4RFS - ECFA1_LACBA -
121 HHSearch 86.0458% - - C1 -4HUQ - ECFA1_LACBA -
122 HHSearch 85.8358% - - C1 -4RFS - ECFA1_LACBA -
2 PsiBlast_PDB 85.1157% - - C1 -4HZU - ECFA1_LACBA -
21 PsiBlast_CBE 76.4954% 13 - C1 -5D3M - ECFA1_LACDA -
5 PsiBlast_PDB 73.9354% 17 - C1 -5D3M - ECFA1_LACDA -
4 PsiBlast_PDB 73.7854% 16 - C1 -5JSZ - ECFA1_LACDA -
131 HHSearch 73.6053% 22 - C1 -5JSZ - ECFA1_LACDA -
23 PsiBlast_CBE 68.2934% -20 - C1 -5X40 7.3 CBIO_RHOCB
130 HHSearch 67.4537% -16 - C1 -5X40 - CBIO_RHOCB -
10 PsiBlast_PDB 67.2334% -14 - C1 -5X40 7.1 CBIO_RHOCB
117 Fugue 67.0130% -73 - C1 -1Z47 - ? -
17 PsiBlast_PDB 65.7834% -31 - C1 -3TUI - METN_ECOLI -
38 PsiBlast_CBE 65.3734% -41 - C1 -3TUI - METN_ECOLI -
129 HHSearch 65.0637% -14 - C1 -5X3X - CBIO_RHOCB -
18 PsiBlast_PDB 64.7534% -31 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 64.6638% -22 - C1 -3GFO - ECFA3_CLOP1 -
25 PsiBlast_CBE 64.6037%-128 - C1 -4HLU 5.8 ECFA1_THEMA
9 PsiBlast_PDB 64.4735% -86 - C1 -5X41 - ? -
6 PsiBlast_PDB 64.2343% 14 - C1 -4MKI 2.5 ECFA2_CALS4
81 PsiBlast_CBE 53.2936% -25 - C1 -2OLK 4.1 ?
83 PsiBlast_CBE 52.9236% -27 - C1 -2OLK 4.0 ?
71 PsiBlast_CBE 51.1336% -24 - C1 -3C41 3.5 ?
74 PsiBlast_CBE 50.9336% -23 - C1 -3C4J 4.4 ?
72 PsiBlast_CBE 50.8436% -25 - C1 -3C41 4.8 ?
76 PsiBlast_CBE 50.4536% -21 - C1 -2Q0H 3.3 ?
73 PsiBlast_CBE 50.3336% -18 - C1 -3C4J 3.3 ?
43 PsiBlast_CBE 50.2739% -13 - C1 -4YMU 4.8 ?
44 PsiBlast_CBE 49.9539% -14 - C1 -4YMU 4.2 ?
42 PsiBlast_CBE 49.9139% -16 - C1 -4YMV 3.6 ?
41 PsiBlast_CBE 49.4139% -14 - C1 -4YMV 4.9 ?
69 PsiBlast_CBE 47.0935% 54 - C1 -3TIF 3.4 Y796_METJA