@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZ02: (2018-01-12 )
MNDPMNYYRVAREEWREFYRNGQAPLTQDELDNIKSLNDRISMQDVRDIYVPLAHLIYLYMKEFESLFLSKGLFLHKYVEVPPFIIGIAGSVAVGKSTTARLLQTILSRTFKRRNVQLITTDGFLYPNRILKERGIMDRKGFPESYDMEMLIDFLNRVKSGQEEIKVPVYSHDVYDIIPDKYELIQQPDILIVEGINTLQLPANQQIYVSDFFDFSVYVDADPVLIEKWYLDRFGALLDTAFQNPENYYYRFAIGDREEAFKMAKDVWKNVNLKNLQEYILPTRGRADIILHKTENHIIDSIFMRKY

Atome Classification :

(56 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COK_A_2(2GEV)
COAA_MYCTU
[Raw transfer]




COK_C_3(2GES)
COAA_MYCTU
[Raw transfer]




COK_C_3(2GES)
COAA_MYCTU
[Raw transfer]




COA_A_2(2ZSD)
COAA_MYCTU
[Raw transfer]




COK_C_3(2GET)
COAA_MYCTU
[Raw transfer]




ZVU_B_6(4BFU)
COAA_MYCTU
[Raw transfer]




ZVU_A_4(4BFU)
COAA_MYCTU
[Raw transfer]




COK_A_2(2GEU)
COAA_MYCTU
[Raw transfer]




ZVT_A_4(4BFT)
COAA_MYCTU
[Raw transfer]




ZVS_A_2(4BFS)
COAA_MYCTU
[Raw transfer]




ZVW_B_6(4BFW)
COAA_MYCTU
[Raw transfer]




ZVV_A_4(4BFV)
COAA_MYCTU
[Raw transfer]




ZVV_B_6(4BFV)
COAA_MYCTU
[Raw transfer]




ZVX_B_6(4BFX)
COAA_MYCTU
[Raw transfer]




COA_A_5(1ESM)
COAA_ECOLI
[Raw transfer]




ZVX_A_4(4BFX)
COAA_MYCTU
[Raw transfer]




ZVW_A_4(4BFW)
COAA_MYCTU
[Raw transfer]




ZVT_B_6(4BFT)
COAA_MYCTU
[Raw transfer]




GOL_A_7(2ZS7)
COAA_MYCTU
[Raw transfer]




GOL_A_11(3AVP)
COAA_MYCTU
[Raw transfer]




ZVY_A_4(4BFY)
COAA_MYCTU
[Raw transfer]




ZVZ_A_4(4BFZ)
COAA_MYCTU
[Raw transfer]




ZVZ_A_4(4BFZ)
COAA_MYCTU
[Raw transfer]




MV1_A_2(3AVQ)
COAA_MYCTU
[Raw transfer]




ZVY_B_6(4BFY)
COAA_MYCTU
[Raw transfer]




GOL_A_11(2ZS7)
COAA_MYCTU
[Raw transfer]




GCP_A_2(3AF4)
COAA_MYCTU
[Raw transfer]




MV2_A_2(3AVP)
COAA_MYCTU
[Raw transfer]




ADP_A_2(2ZS8)
COAA_MYCTU
[Raw transfer]




ACP_A_2(3AF2)
COAA_MYCTU
[Raw transfer]




ZVZ_B_6(4BFZ)
COAA_MYCTU
[Raw transfer]




ADP_A_2(2ZS9)
COAA_MYCTU
[Raw transfer]




ATP_A_2(2ZSF)
COAA_MYCTU
[Raw transfer]




GCP_A_2(3AF3)
COAA_MYCTU
[Raw transfer]




ADP_A_2(2ZSB)
COAA_MYCTU
[Raw transfer]




GDP_A_2(3AEZ)
COAA_MYCTU
[Raw transfer]




ADP_A_3(4NE2)
COAA_KLEP3
[Raw transfer]




ADP_N_14(1SQ5)
COAA_ECOLI
[Raw transfer]




ADP_A_3(4NE2)
COAA_KLEP3
[Raw transfer]




GDP_A_2(3AF1)
COAA_MYCTU
[Raw transfer]




ADP_B_6(4NE2)
COAA_KLEP3
[Raw transfer]




ADP_A_3(3TQC)
COAA_COXBU
[Raw transfer]




PAU_A_3(3AVO)
COAA_MYCTU
[Raw transfer]




ADP_A_3(3TQC)
COAA_COXBU
[Raw transfer]




ADP_B_4(3TQC)
COAA_COXBU
[Raw transfer]




ADP_R_18(1SQ5)
COAA_ECOLI
[Raw transfer]




ADP_A_2(2ZSA)
COAA_MYCTU
[Raw transfer]




ADP_R_18(1SQ5)
COAA_ECOLI
[Raw transfer]




ADP_B_4(3TQC)
COAA_COXBU
[Raw transfer]




GDP_A_2(3AF0)
COAA_MYCTU
[Raw transfer]




ACP_A_2(2ZSE)
COAA_MYCTU
[Raw transfer]




38 PsiBlast_CBE 88.4443% -77 - C2 -3TQC 7.8 COAA_COXBU
4 PsiBlast_PDB 88.3543% -72 - C2 -3TQC 6.9 COAA_COXBU
5 PsiBlast_PDB 86.8044% -67 - C2 -1ESM 7.3 COAA_ECOLI
6 PsiBlast_PDB 86.6544% -71 - C2 -1ESN - COAA_ECOLI -
76 HHSearch 85.8846% -73 - C2 -1SQ5 8.1 COAA_ECOLI
34 PsiBlast_CBE 85.7644% -66 - C2 -4F7W - COAA_KLEP3 -
36 PsiBlast_CBE 85.5345% -73 - C2 -1SQ5 8.1 COAA_ECOLI
27 PsiBlast_CBE 85.5244% -67 - C2 -4GI7 - COAA_KLEP3 -
2 PsiBlast_PDB 84.4844% -64 - C2 -4GI7 - COAA_KLEP3 -
35 PsiBlast_CBE 84.4644% -65 - C2 -4F7W - COAA_KLEP3 -
28 PsiBlast_CBE 84.4644% -67 - C2 -4GI7 - COAA_KLEP3 -
73 HHSearch 84.3145% -66 * C2 *4NE2 7.1 COAA_KLEP3
1 PsiBlast_PDB 84.0244% -64 - C2 -4F7W - COAA_KLEP3 -
3 PsiBlast_PDB 83.5144% -66 - C2 -4NE2 7.1 COAA_KLEP3
37 PsiBlast_CBE 83.4445% -70 - C2 -1SQ5 8.3 COAA_ECOLI
21 PsiBlast_CBE 82.9244% -62 - C2 -4NE2 8.2 COAA_KLEP3
46 PsiBlast_CBE 82.5444% -29 - C2 -4BFW 7.8 COAA_MYCTU
71 HHSearch 82.4345% -31 - C2 -2GES 8.4 COAA_MYCTU
53 PsiBlast_CBE 82.2344% -32 - C2 -4BFS 7.0 COAA_MYCTU
8 PsiBlast_PDB 82.1144% -30 - C2 -3AVQ 5.4 COAA_MYCTU
72 HHSearch 81.9445% -25 - C2 -4BFZ 6.9 COAA_MYCTU
45 PsiBlast_CBE 81.3244% -25 - C2 -4BFW 8.0 COAA_MYCTU
47 PsiBlast_CBE 81.1944% -27 - C2 -4BFV 7.0 COAA_MYCTU
11 PsiBlast_PDB 81.0044% -31 - C2 -2GEU 8.4 COAA_MYCTU
74 HHSearch 80.9845% -23 - C2 -3TQC 6.9 COAA_COXBU
54 PsiBlast_CBE 80.9744% -28 - C2 -3AVP 3.4 COAA_MYCTU
49 PsiBlast_CBE 80.8944% -24 - C2 -4BFU 8.0 COAA_MYCTU
43 PsiBlast_CBE 80.8844% -21 - C2 -4BFX 6.2 COAA_MYCTU
42 PsiBlast_CBE 80.7244% -25 - C2 -4BFY 6.7 COAA_MYCTU
75 HHSearch 80.6445% -25 - C2 -3TQC 7.8 COAA_COXBU
9 PsiBlast_PDB 80.6144% -28 - C2 -2GES 8.4 COAA_MYCTU
51 PsiBlast_CBE 80.4644% -23 - C2 -4BFT 7.0 COAA_MYCTU
14 PsiBlast_PDB 80.3344% -26 - C2 -2ZS8 7.0 COAA_MYCTU
48 PsiBlast_CBE 80.2944% -27 - C2 -4BFV 6.8 COAA_MYCTU
15 PsiBlast_PDB 80.2844% -28 - C2 -2ZS9 6.9 COAA_MYCTU
50 PsiBlast_CBE 80.1944% -23 - C2 -4BFU 8.1 COAA_MYCTU
10 PsiBlast_PDB 80.1844% -25 - C2 -2GET 6.9 COAA_MYCTU
57 PsiBlast_CBE 80.1744% -22 - C2 -3AF2 6.7 COAA_MYCTU
60 PsiBlast_CBE 80.1544% -29 - C2 -3AEZ 6.9 COAA_MYCTU
13 PsiBlast_PDB 79.9744% -24 - C2 -2ZS7 2.9 COAA_MYCTU
56 PsiBlast_CBE 79.9044% -22 - C2 -3AF3 4.9 COAA_MYCTU
55 PsiBlast_CBE 79.7944% -27 - C2 -3AF4 6.9 COAA_MYCTU
59 PsiBlast_CBE 79.7544% -27 - C2 -3AF0 5.9 COAA_MYCTU
18 PsiBlast_PDB 79.6544% -30 - C2 -2ZSD 8.3 COAA_MYCTU
44 PsiBlast_CBE 79.6144% -25 - C2 -4BFX 6.4 COAA_MYCTU
39 PsiBlast_CBE 79.6044% -22 - C2 -4BFZ 7.2 COAA_MYCTU
20 PsiBlast_PDB 79.5344% -24 - C2 -2ZSF 5.8 COAA_MYCTU
16 PsiBlast_PDB 79.5044% -23 - C2 -2ZSA 6.5 COAA_MYCTU
41 PsiBlast_CBE 79.4044% -23 - C2 -4BFY 6.9 COAA_MYCTU
40 PsiBlast_CBE 79.3944% -20 - C2 -4BFZ 6.9 COAA_MYCTU
7 PsiBlast_PDB 79.2444% -24 - C2 -3AVO 2.3 COAA_MYCTU
52 PsiBlast_CBE 79.0944% -23 - C2 -4BFT 7.3 COAA_MYCTU
58 PsiBlast_CBE 78.9644% -26 - C2 -3AF1 6.5 COAA_MYCTU
19 PsiBlast_PDB 78.7844% -25 - C2 -2ZSE 5.0 COAA_MYCTU
12 PsiBlast_PDB 78.4944% -24 - C2 -2GEV 8.8 COAA_MYCTU
17 PsiBlast_PDB 78.2744% -26 - C2 -2ZSB 6.5 COAA_MYCTU