@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZ28: (2018-01-12 )
MVRVKGLNIGSGRPKICAPLIGAVREEVLREAVLAREAGADLVEWRVDHYREVFSFDEVAETLVLIHEMLDGLPLLFTFRTLAEGGEQDISIRQYRDLYEHVIHTGLVDMVDIELFKVESLGKRLIEEIKSLNIPLIISSHDFKETPADPVLLYRLNVMEHFGADIGKLAVTPNNERDVLRLMELTRRANAFVSMPIITMSMGNLGKISRLVGGTTGSVMTFGSLSSDSTSAPGQLPVKALKQIIQLLNEPL

Atome Classification :

(55 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_A_3(3LB0)
AROD_SALTY
[Raw transfer]




CIT_B_8(4CNN)
AROD_SALTI
[Raw transfer]




9C4_B_8(4CNP)
AROD_SALTI
[Raw transfer]




CIT_B_8(4CNN)
AROD_SALTI
[Raw transfer]




QIC_A_3(4GUI)
AROD_SALTY
[Raw transfer]




9C4_A_3(4CNP)
AROD_SALTI
[Raw transfer]




DQA_B_4(3NNT)
AROD_SALTY
[Raw transfer]




DQA_A_3(3NNT)
AROD_SALTY
[Raw transfer]




QIC_B_4(4IUO)
AROD_SALTY
[Raw transfer]




SKM_A_3(4GUJ)
AROD_SALTY
[Raw transfer]




QIC_A_3(4IUO)
AROD_SALTY
[Raw transfer]




VAU_A_2(4UIO)
AROD_SALTI
[Raw transfer]




DHS_F_6(1L9W)
AROD_SALTI
[Raw transfer]




TLA_D_4(2GPT)
DHQSD_ARATH
[Raw transfer]




QIC_B_6(4GUI)
AROD_SALTY
[Raw transfer]




9PY_B_6(4CNO)
AROD_SALTI
[Raw transfer]




SKM_B_7(4GUJ)
AROD_SALTY
[Raw transfer]




3DS_A_4(4GUG)
AROD_SALTY
[Raw transfer]




DHS_E_5(1L9W)
AROD_SALTI
[Raw transfer]




DHS_G_7(1L9W)
AROD_SALTI
[Raw transfer]




DHS_D_8(3JS3)
AROD_PEPD6
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




9PY_D_8(4CNO)
AROD_SALTI
[Raw transfer]




DHS_A_5(3JS3)
AROD_PEPD6
[Raw transfer]




DHS_C_7(3JS3)
AROD_PEPD6
[Raw transfer]




3DS_A_3(4GUH)
AROD_SALTY
[Raw transfer]




9PY_A_5(4CNO)
AROD_SALTI
[Raw transfer]




WPL_B_7(4CLM)
AROD_SALTI
[Raw transfer]




DHS_A_3(1QFE)
AROD_SALTI
[Raw transfer]




DHS_B_4(1QFE)
AROD_SALTI
[Raw transfer]




3DS_B_5(4GUG)
AROD_SALTY
[Raw transfer]




DHS_B_4(1QFE)
AROD_SALTI
[Raw transfer]




DHS_H_8(1L9W)
AROD_SALTI
[Raw transfer]




DHS_B_6(3JS3)
AROD_PEPD6
[Raw transfer]




3DS_B_5(4GUH)
AROD_SALTY
[Raw transfer]




DHK_A_3(2O7S)
DHQSD_ARATH
[Raw transfer]




DHK_A_5(2O7Q)
DHQSD_ARATH
[Raw transfer]




DHK_A_3(2O7S)
DHQSD_ARATH
[Raw transfer]




BO3_A_13(3S42)
AROD_SALTY
[Raw transfer]




DHK_A_5(2O7Q)
DHQSD_ARATH
[Raw transfer]




MLA_B_3(3S42)
AROD_SALTY
[Raw transfer]




9PY_C_7(4CNO)
AROD_SALTI
[Raw transfer]




SHL_A_7(4H3D)
AROD_PEPD6
[Raw transfer]




MLA_A_10(3S42)
AROD_SALTY
[Raw transfer]




SHL_D_13(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_B_9(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_B_9(4H3D)
AROD_PEPD6
[Raw transfer]




SHL_C_12(4H3D)
AROD_PEPD6
[Raw transfer]




SIN_B_9(4GFS)
AROD_SALTY
[Raw transfer]




EDO_A_5(2OCZ)
AROD_STRP1
[Raw transfer]




PEG_A_6(4H3D)
AROD_PEPD6
[Raw transfer]




6 PsiBlast_PDB 86.8742% -92 - C5 -4GUI 5.2 AROD_SALTY
45 PsiBlast_CBE 86.8341% -92 - C5 -3NNT 5.3 AROD_SALTY
38 PsiBlast_CBE 86.6442% -89 - C5 -3S42 2.8 AROD_SALTY
35 PsiBlast_CBE 86.5242% -91 - C5 -3M7W - AROD_SALTY -
9 PsiBlast_PDB 86.5142% -87 - C5 -3LB0 3.9 AROD_SALTY
37 PsiBlast_CBE 86.4742% -93 - C5 -3M7W - AROD_SALTY -
27 PsiBlast_CBE 86.3442% -92 - C5 -4GUJ 3.5 AROD_SALTY
8 PsiBlast_PDB 86.2542%-100 - C5 -3L2I - AROD_SALTY -
4 PsiBlast_PDB 86.1642% -91 - C5 -3OEX - AROD_SALTY -
51 PsiBlast_CBE 86.1540%-103 - C5 -4CNP 4.0 AROD_SALTI
16 PsiBlast_PDB 86.1541% -93 - C5 -3NNT 5.3 AROD_SALTY
44 PsiBlast_CBE 86.1341% -90 - C5 -4IUO 5.1 AROD_SALTY
7 PsiBlast_PDB 86.0842% -92 - C5 -4GUJ 5.6 AROD_SALTY
33 PsiBlast_CBE 86.0542% -90 - C5 -3M7W - AROD_SALTY -
15 PsiBlast_PDB 86.0341% -90 - C5 -3O1N - AROD_SALTY -
29 PsiBlast_CBE 85.9942% -94 - C5 -4GFS 3.6 AROD_SALTY
23 PsiBlast_CBE 85.7642% -51 - C5 -4H3D 2.9 AROD_PEPD6
14 PsiBlast_PDB 85.7641% -92 - C5 -4GUH 4.5 AROD_SALTY
28 PsiBlast_CBE 85.6542% -92 - C5 -4GUI 3.9 AROD_SALTY
40 PsiBlast_CBE 85.6441% -90 - C5 -4GUH 5.0 AROD_SALTY
17 PsiBlast_PDB 85.5641% -93 - C5 -4IUO 4.6 AROD_SALTY
13 PsiBlast_PDB 85.4841%-100 - C5 -4GUG 3.0 AROD_SALTY
52 PsiBlast_CBE 85.4640% -97 - C5 -4CNP 4.0 AROD_SALTI
50 PsiBlast_CBE 85.2140% -97 - C5 -4UIO 4.3 AROD_SALTI
25 PsiBlast_CBE 85.2142% -48 - C5 -3JS3 4.9 AROD_PEPD6
59 PsiBlast_CBE 85.2040% -97 - C5 -4CLM 3.6 AROD_SALTI
21 PsiBlast_CBE 85.0242% -50 - C5 -4H3D 2.8 AROD_PEPD6
1 PsiBlast_PDB 84.8342% -47 - C5 -3JS3 4.5 AROD_PEPD6
48 PsiBlast_CBE 84.7740% -98 - C5 -1L9W 3.9 AROD_SALTI
49 PsiBlast_CBE 84.7640% -95 - C5 -1L9W 4.1 AROD_SALTI
10 PsiBlast_PDB 84.7142% -83 - C5 -3S42 2.9 AROD_SALTY
57 PsiBlast_CBE 84.5140%-104 - C5 -4CNN 4.6 AROD_SALTI
24 PsiBlast_CBE 84.5142% -50 - C5 -3JS3 4.1 AROD_PEPD6
22 PsiBlast_CBE 84.4842% -49 - C5 -4H3D 3.1 AROD_PEPD6
18 PsiBlast_PDB 84.2640% -96 - C5 -1QFE 4.5 AROD_SALTI
53 PsiBlast_CBE 84.1040%-103 - C5 -4CNO 4.1 AROD_SALTI
46 PsiBlast_CBE 83.9940% -96 - C5 -1QFE 4.7 AROD_SALTI
41 PsiBlast_CBE 83.8941% -98 - C5 -4GUG 4.6 AROD_SALTY
19 PsiBlast_PDB 83.7040% -90 - C5 -1L9W 4.5 AROD_SALTI
47 PsiBlast_CBE 83.6440% -96 - C5 -1L9W 4.1 AROD_SALTI
26 PsiBlast_CBE 83.5442% -48 - C5 -3JS3 3.3 AROD_PEPD6
54 PsiBlast_CBE 83.4640% -96 - C5 -4CNO 3.2 AROD_SALTI
2 PsiBlast_PDB 83.4342% -47 - C5 -4H3D 3.1 AROD_PEPD6
55 PsiBlast_CBE 83.3840% -98 - C5 -4CNO 3.6 AROD_SALTI
56 PsiBlast_CBE 83.2840%-100 - C5 -4CNO 4.1 AROD_SALTI
68 HHSearch 81.7842% -44 - C5 -4H3D 2.9 AROD_PEPD6
67 HHSearch 78.2641% -45 * C5 *1QFE 4.7 AROD_SALTI
66 HHSearch 78.2241% -53 - C5 -4CNN 4.6 AROD_SALTI
87 Fugue 77.9140% -10 - C5 -1QFE 4.5 AROD_SALTI
79 HHSearch 70.3632% -98 - C5 -2O7Q 3.6 DHQSD_ARATH
78 HHSearch 70.0632%-101 - C5 -2O7S 3.5 DHQSD_ARATH
61 PsiBlast_CBE 69.3333% -90 - C5 -2GPT 3.9 DHQSD_ARATH
63 PsiBlast_CBE 68.1633% -89 - C5 -2O7Q 3.6 DHQSD_ARATH
62 PsiBlast_CBE 67.5233% -93 - C5 -2O7S 3.5 DHQSD_ARATH
72 HHSearch 64.0531% -72 - C5 -2OCZ 3.4 AROD_STRP1