@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZ80: (2018-01-13 )
MMEHEMTIDEAAKRAEELRTRLNQWSREYYVEDKPTVEDYVYDKEYAELVAIEEQYPDLITSDSPTQRVGGKVLEGFEKVTHDIPLYSLNDVFSKEELIAFDQRVQKAVGRVVDYCCELKIDGLSVSLRYEDGNFVRGATRGDGTVGENITENLKTVRSVPIKLKEPMNIEVRGECFMPKRSFVQLNQDREAEGKDIFANPRNAAAGSLRQLDSKITAKRNLDTFLYTVADFGPMQAKTQYDALEELEKIGFHTNREKRLCHSIDEVWSYIEEYHDKRVDLPYEIDGIVIKVNEFSLQDQLGFTIKAPRWAAAYKFPPEEVETLIENIEWTVGRTGVVTPTAIMTPVRVAGTTVSRASLHNGDYIKLKDIRLKDTVLIYKAGDIIPEVSQVVLDKRPKDSEEYQLPTHCPVCGSELVHLDEEVALRCINPKCPAQMKEGLNHFVSRNAMNIDGLGPRVLEQMYDKKLVADVADLYKLTEEELLTLDKIKEKSANNILTAIDNSKDNSVERLIFGLGIRHVGAKAAKILAEHFGDLETLSKSDYESIIALDTIGDIIADSVVTYFSNEEVHELMNELKQAGVNFEYKGLRNAQLQEVESPFKEKTVVLTGKLTRFTREEAKETIENLGGKVTGSVSKKTDIVVAGEDAGSKLTKAQELGIEVWTEDQMADALAKSRSVEE

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3BA_A_7(3BAA)
DNLJ_ENTFA
[Raw transfer]




3BD_A_7(3BAB)
DNLJ_ENTFA
[Raw transfer]




0OW_A_5(4EFB)
DNLJ_ENTFA
[Raw transfer]




0OV_A_5(4EFE)
DNLJ_ENTFA
[Raw transfer]




0OX_A_5(4EEQ)
DNLJ_ENTFA
[Raw transfer]




3B8_A_6(3BA8)
DNLJ_ENTFA
[Raw transfer]




0XT_B_6(4GLW)
DNLJ_STRZP
[Raw transfer]




3B9_A_7(3BA9)
DNLJ_ENTFA
[Raw transfer]




0XT_B_6(4GLW)
DNLJ_STRZP
[Raw transfer]




IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]




IVH_A_2(3PN1)
DNLJ_HAEIN
[Raw transfer]




D41_A_2(4UCO)
DNLJ_HAEIN
[Raw transfer]




0XT_A_4(4GLW)
DNLJ_STRZP
[Raw transfer]




AMP_D_10(2OWO)
DNLJ_ECOLI
[Raw transfer]




0XS_A_7(4GLX)
DNLJ_ECOLI
[Raw transfer]




GOL_E_5(1TA8)
DNLJ_ENTFA
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




3B9_A_5(3BAC)
DNLJ_HAEIN
[Raw transfer]




AMP_A_3(3UQ8)
DNLJ_HAEIN
[Raw transfer]




AMP_A_5(1V9P)
DNLJ_THEFI
[Raw transfer]




IA7_A_2(4UFZ)
DNLJ_HAEIN
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




AMP_A_5(1DGS)
DNLJ_THEFI
[Raw transfer]




1X8_A_2(4LH7)
DNLJ_ENTFA
[Raw transfer]




1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]




L5Y_A_3(4CC6)
DNLJ_STAAU
[Raw transfer]




1X7_A_2(4LH6)
DNLJ_ENTFA
[Raw transfer]




AMP_B_6(1V9P)
DNLJ_THEFI
[Raw transfer]




AMP_B_6(1DGS)
DNLJ_THEFI
[Raw transfer]




AMP_B_6(1V9P)
DNLJ_THEFI
[Raw transfer]




L5V_A_3(4CC5)
DNLJ_STAAU
[Raw transfer]




10L_A_2(5FPO)
DNLJ_STAAU
[Raw transfer]




NACID_C_2(4GLX)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(2OWO)
DNLJ_ECOLI
[Raw transfer]

-

NACID_C_2(4GLX)
DNLJ_ECOLI
[Raw transfer]

-

2 PsiBlast_PDB 77.6446% 11 - C11 -5TT5 - DNLJ_ECOLI -
9 PsiBlast_PDB 77.0875% -67 - C11 -4EEQ 5.1 DNLJ_ENTFA
11 PsiBlast_PDB 76.6975% -70 - C11 -4EFE 7.0 DNLJ_ENTFA
10 PsiBlast_PDB 75.8575% -67 - C11 -4EFB 6.5 DNLJ_ENTFA
5 PsiBlast_PDB 75.5774% -68 - C11 -3BA9 8.7 DNLJ_ENTFA
54 HHSearch 75.4445% 30 - C11 -5TT5 - DNLJ_ECOLI -
8 PsiBlast_PDB 75.3274% -65 - C11 -1TA8 2.3 DNLJ_ENTFA
56 HHSearch 75.2744% 19 - C11 -4GLX 6.2 DNLJ_ECOLI
4 PsiBlast_PDB 75.2674% -70 - C11 -3BA8 6.4 DNLJ_ENTFA
14 PsiBlast_PDB 74.9844% 15 - C11 -4GLX 6.9 DNLJ_ECOLI
1 PsiBlast_PDB 74.7946% 32 - C11 -2OWO 6.4 DNLJ_ECOLI
6 PsiBlast_PDB 74.3874% -65 - C11 -3BAA 8.1 DNLJ_ENTFA
7 PsiBlast_PDB 74.0374% -64 - C11 -3BAB 8.2 DNLJ_ENTFA
60 HHSearch 73.6575% -62 - C11 -4LH6 4.7 DNLJ_ENTFA
12 PsiBlast_PDB 73.4074% -62 - C11 -4LH6 4.7 DNLJ_ENTFA
3 PsiBlast_PDB 72.8074% 0 - C- -1TAE - DNLJ_ENTFA -
13 PsiBlast_PDB 72.2874% -59 - C11 -4LH7 4.7 DNLJ_ENTFA
44 Fugue 71.1741% 36 - C11 -1DGS 5.2 DNLJ_THEFI
16 PsiBlast_PDB 70.8742% 33 - C11 -1V9P 4.5 DNLJ_THEFI
15 PsiBlast_PDB 69.7641% 45 - C11 -1DGS 5.7 DNLJ_THEFI
24 PsiBlast_CBE 69.3741% 45 - C11 -1DGS 5.3 DNLJ_THEFI
25 PsiBlast_CBE 69.1442% 41 - C11 -1V9P 4.8 DNLJ_THEFI
55 HHSearch 67.9042% 41 - C11 -1V9P 4.4 DNLJ_THEFI
20 PsiBlast_PDB 65.0057% -49 - C11 -4CC5 4.1 DNLJ_STAAU
27 PsiBlast_CBE 64.9557% -53 - C11 -5FPO 3.0 DNLJ_STAAU
30 PsiBlast_CBE 63.7256% -69 - C11 -4GLW 4.7 DNLJ_STRZP
28 PsiBlast_CBE 63.6957% -49 - C11 -4CC6 7.2 DNLJ_STAAU
63 HHSearch 62.6556% -67 * C11 *4GLW 4.7 DNLJ_STRZP
31 PsiBlast_CBE 62.3956% -68 - C11 -4GLW 5.1 DNLJ_STRZP
62 HHSearch 54.1447% 3 - C11 -3PN1 7.0 DNLJ_HAEIN
61 HHSearch 53.8147% 14 - C11 -3UQ8 6.7 DNLJ_HAEIN
32 PsiBlast_CBE 53.3646% -2 - C11 -4UFZ 6.9 DNLJ_HAEIN
39 PsiBlast_CBE 52.7146% 13 - C11 -3UQ8 6.7 DNLJ_HAEIN
38 PsiBlast_CBE 52.7146% 0 - C11 -4UCO 6.8 DNLJ_HAEIN
40 PsiBlast_CBE 52.4746% 2 - C11 -3PN1 7.0 DNLJ_HAEIN
41 PsiBlast_CBE 47.2945% 2 - C11 -3BAC 8.2 DNLJ_HAEIN