@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZ98: (2018-01-13 )
MNEELILAIESSCDETSVAVVRNGTEILSNIVASQINSHKRFGGVVPEVASRHHVEQITLCLEDALVEAGVSAEDLSAVAVTYGPGLVGSLLIGISAAKAFAWAHQLPLIPVNHMAGHIYAARLVKPFQFPLMALLVSGGHTELVYMQEDGSYEIIGETRDDAAGEAYDKVGRVLGLSYPSGKEIDQLAHQGKDNYHFPRAMIHEDNYDFSFSGLKSAFINLVHNAQQRGEDLDKNDLAASFQASVIDVLITKTLRACQNYPVKQLIIAGGVAANQGLREGLQDALAAKLPEVELVIPPLRLCGDNAAMIGAAAHVEMQKRNFASYQLNADPSLVLSE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4WQ4)
TSAD_ECOLI
[Raw transfer]




AGS_B_10(3ZEU)
TSAD_SALTY
[Raw transfer]




AGS_E_16(3ZEU)
TSAD_SALTY
[Raw transfer]




AGS_E_16(3ZEU)
TSAD_SALTY
[Raw transfer]




ATP_B_14(4WQ5)
TSAD_ECOLI
[Raw transfer]




ADP_A_5(4YDU)
TSAD_ECOLI
[Raw transfer]




ADP_B_12(4YDU)
TSAD_ECOLI
[Raw transfer]




ATP_B_9(4WQ4)
TSAD_ECOLI
[Raw transfer]




ATP_A_7(4WQ5)
TSAD_ECOLI
[Raw transfer]




ANP_B_4(2VWB)
KAE1B_METJA
[Raw transfer]




ANP_A_3(2VWB)
KAE1B_METJA
[Raw transfer]




AMP_B_4(3ZET)
?
[Raw transfer]




AMP_A_4(3WUH)
QRI7_YEAST
[Raw transfer]




5 PsiBlast_PDB 82.1041% -45 - C2 -4WQ5 6.6 TSAD_ECOLI
3 PsiBlast_PDB 82.0742% -41 - C2 -4YDU 6.5 TSAD_ECOLI
22 PsiBlast_CBE 81.8642% -43 - C2 -4YDU 6.4 TSAD_ECOLI
24 PsiBlast_CBE 81.3041% -42 - C2 -4WQ5 6.9 TSAD_ECOLI
2 PsiBlast_PDB 81.1942% -42 - C2 -3ZEU 7.4 TSAD_SALTY
54 HHSearch 81.0842% -46 - C2 -3ZEU 6.7 TSAD_SALTY
23 PsiBlast_CBE 81.0041% -43 - C2 -4WQ4 5.8 TSAD_ECOLI
4 PsiBlast_PDB 80.8041% -43 - C2 -4WQ4 5.5 TSAD_ECOLI
1 PsiBlast_PDB 80.2542% -47 - C2 -3ZET 5.9 ?
21 PsiBlast_CBE 80.0842% -44 - C2 -3ZEU 6.7 TSAD_SALTY
38 Fugue 77.2531%-115 - C2 -2IVN - KAE1_PYRAB -
8 PsiBlast_PDB 75.5233%-131 - C2 -2IVP - KAE1_PYRAB -
6 PsiBlast_PDB 75.0333%-131 - C2 -2IVN - KAE1_PYRAB -
7 PsiBlast_PDB 74.9033%-132 - C2 -2IVO - KAE1_PYRAB -
49 HHSearch 70.7829% 0 - C- -3EN9 - KAE1B_METJA -
56 HHSearch 69.8532% -23 * C2 *2IVO - KAE1_PYRAB -
55 HHSearch 69.1632% -21 - C2 -2IVN - KAE1_PYRAB -
50 HHSearch 67.4829% -28 - C2 -2VWB - KAE1B_METJA -
53 HHSearch 66.7228% -52 - C2 -3ENO - KAE1B_THEAC -
29 PsiBlast_CBE 66.0631% -55 - C2 -5JMV - KAE1B_METJA -