@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZC8: (2018-01-13 )
MLKELKVTDLKKTYGEKDLFDQISFLVHEKDRIGLIGTNGTGKTSLLNIIAGIDSSDGDRQTVFYPTDYRIGYLSQAAEFSDELTVLQAVFQGNSPLIQTVRAYEEALIELGENGEDPDVQKRYAKAEEQMNKEDAWTTDTNAKIILQKLGISELDKKISTLSGGQKKRVSLAQVLIDEPDLLLLDEPTNHLDYEAIEWLENYLKQYRGALLMVTHDRYFLDRVANRIFELSFGKLYEYKGNYEAYVLEKAERDRVEVEQEEKRKRLYKQELAWMRAGVQARGTKQQARINRFEDLKENLYQVNQEDDLELNLATQRLGKKVLEIKDGSYRINDQTLLEHLDLLIQSRERLGITGKNGAGKSTLLNILAGRIPLDSGTMSIGETVHLAYYTQENEEMAPDKRMIAYLQEAAEEAKTADGSQIGVAELLERFLFPRFMHGTLIGKLSGGEKRRLFLLKLLIQQPNVLLLDEPTNDLDIATLTILEDYFRSFPGAVITVSHDRYFLDKVADKLLVFQGNGKQELYYGNMSSYLLKQKETQQPAEKAKPKIQSKEPAEKKKLSYMEQKEWETIEDEIAELEEKISLLQEEMNHQGDNFTRLQELQNDVSETEAQLEEKMARWEYLSEWVED

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_7(3BK7)
?
[Raw transfer]



ADP_B_4(3J15)
?
[Raw transfer]
2 PsiBlast_PDB 77.3737% 11 - C1 -4FIN - ETTA_ECOLI -
38 HHSearch 76.6236% 27 - C1 -3J5S - ETTA_ECOLI -
1 PsiBlast_PDB 76.5037% 28 - C1 -3J5S - ETTA_ECOLI -
53 HHSearch 68.5626% -18 - C1 -2IX8 - -
45 HHSearch 62.1526% 22 - C1 -2IW3 - EF3A_YEAST -
7 PsiBlast_PDB 55.8723% 28 - C1 -3OZX - ? -
6 PsiBlast_PDB 52.9927% -1 - C1 -2IW3 - EF3A_YEAST -
59 HHSearch 52.8523% 26 - C1 -1YQT - ? -
8 PsiBlast_PDB 52.2724% 30 - C1 -3BK7 3.6 ?
4 PsiBlast_PDB 51.8928% -1 - C1 -2IX3 - EF3A_YEAST -
3 PsiBlast_PDB 51.6328% -3 - C1 -2IWH - EF3A_YEAST -
10 PsiBlast_PDB 51.2824% 27 - C1 -5LW7 - ? -
9 PsiBlast_PDB 51.1724% 27 - C1 -3J15 3.7 ?
61 HHSearch 50.0825% -18 * C1 *3RLF - MALK_ECOLI -
66 Fugue 49.7418% 64 - C1 -3J16 - RLI1_YEAST -
5 PsiBlast_PDB 49.5027% 6 - C1 -2IX8 - -
54 HHSearch 49.3420% 13 - C1 -4CRM - RLI1_YEAST -
12 PsiBlast_PDB 48.7625% 20 - C1 -1YQT - ? -
64 HHSearch 47.3727% -16 - C1 -3FVQ - FBPC_NEIG1 -
62 HHSearch 45.5925% -13 - C1 -2AWN - MALK_ECOLI -