@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZD0: (2018-01-13 )
MSKINAGIAMVKVLESWGIDHIYGIPGGSFNSIMDALYQEKTEINYIQVRHEEVGALAAAADAKLTGKVGAVFGSAGPGATHLINGLYDAQMDHVPLVAFLGQVASTSMNYNSFQELNENPIFADVSVYNRTVMTPQSLPHVVDEAIKAAYEHKGVAIVTIPVDLGFEEIDEQPFSTAHTHKTSVILPEEKDLLAALPYLEKAKKPVLYVGQGTRNGFPQIKEFSEHFSVPVVASVLAKGIIPDDYENFLGFAGRVATKPGNEALAEADLILFVGSDFPFGRAFFNPTAEFIQIDIDASKFGRRHETSLSILGDANTALQRLVELGDARPADSWYLANQENKEKWVNWLKSFEDREEEPIRPEAVYKEINRIAEDDAIFVTDVGNTTIHSIRLLNMNGKQKHTTSGWFATMGNGVPGGIAAQLSYPEKQVFTLSGDGGFAMVMQDIITQVKYQLPIINVVFSNDSFGFIEAEQEDTEQKKFGVFLEDADFGKVGEALGANSFTVTEYSQLRFAFDAAAKSDRPVVIDVKINNKRPLPVEDLHLDPRKYSEEEIQAFKEKYEVHDLPVLNELYEKRL

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TPP_A_7(1POX)
POXB_LACPL
[Raw transfer]




TPP_A_5(1POW)
POXB_LACPL
[Raw transfer]




TPP_A_9(2EZ4)
POXB_LACPL
[Raw transfer]




TDK_B_9(2EZ9)
POXB_LACPL
[Raw transfer]




TDM_A_10(4FEE)
?
[Raw transfer]




TDK_A_7(2EZ9)
POXB_LACPL
[Raw transfer]




TPP_A_7(1POX)
POXB_LACPL
[Raw transfer]




TDM_B_21(4FEG)
?
[Raw transfer]




TDM_B_16(4FEE)
?
[Raw transfer]




FAD_B_12(4KGD)
?
[Raw transfer]




TDP_B_14(4KGD)
?
[Raw transfer]




TDP_A_3(3EY9)
POXB_ECOLI
[Raw transfer]




FAD_B_10(1POX)
POXB_LACPL
[Raw transfer]




TDP_B_14(4KGD)
?
[Raw transfer]




TPP_B_7(1POW)
POXB_LACPL
[Raw transfer]




TDP_A_6(4KGD)
?
[Raw transfer]




TPP_B_9(1POX)
POXB_LACPL
[Raw transfer]




TPP_B_9(1POX)
POXB_LACPL
[Raw transfer]




TDP_B_7(3EY9)
POXB_ECOLI
[Raw transfer]




TDM_B_12(2EZT)
POXB_LACPL
[Raw transfer]




TDL_A_7(2EZ8)
POXB_LACPL
[Raw transfer]




TDL_B_10(2EZ8)
POXB_LACPL
[Raw transfer]




HTL_A_4(1V5G)
?
[Raw transfer]




TDM_A_10(4FEG)
?
[Raw transfer]




GOL_A_11(1POX)
POXB_LACPL
[Raw transfer]




56 HHSearch 94.6149% -23 - C7 -1POX 7.8 POXB_LACPL
29 PsiBlast_CBE 94.2748% -10 - C7 -2EZU - POXB_LACPL -
22 PsiBlast_CBE 94.2349% -12 - C7 -1POW 7.2 POXB_LACPL
63 HHSearch 94.1848% -19 - C7 -4KGD 8.2 ?
23 PsiBlast_CBE 93.8549% -10 - C7 -4KGD 10.3 ?
5 PsiBlast_PDB 93.7049% -9 - C7 -4KGD 8.0 ?
2 PsiBlast_PDB 93.5949% -9 - C7 -1POW 7.5 POXB_LACPL
33 PsiBlast_CBE 93.5648% -9 - C7 -2EZ4 - POXB_LACPL -
4 PsiBlast_PDB 93.5549% -10 - C7 -4FEG 8.3 ?
25 PsiBlast_CBE 93.4949% -11 - C7 -4FEE 8.1 ?
21 PsiBlast_CBE 93.4849% -12 - C7 -1POX 11.3 POXB_LACPL
30 PsiBlast_CBE 93.4648% -8 - C7 -2EZT 8.4 POXB_LACPL
1 PsiBlast_PDB 93.4349% -11 - C7 -1POX 7.7 POXB_LACPL
28 PsiBlast_CBE 93.3048% -30 - C7 -1Y9D - POXB_LACPL -
7 PsiBlast_PDB 93.1948% -9 - C7 -2EZ4 8.2 POXB_LACPL
24 PsiBlast_CBE 93.1549% -10 - C7 -4FEG 8.2 ?
31 PsiBlast_CBE 93.1348% -7 - C7 -2EZ9 7.2 POXB_LACPL
32 PsiBlast_CBE 93.0948% -8 - C7 -2EZ8 7.2 POXB_LACPL
26 PsiBlast_CBE 93.0748% -31 - C7 -1Y9D - POXB_LACPL -
11 PsiBlast_PDB 93.0248% -8 - C7 -2EZU - POXB_LACPL -
3 PsiBlast_PDB 92.9649% -10 - C7 -4FEE 8.0 ?
8 PsiBlast_PDB 92.6948% -9 - C7 -2EZ8 7.0 POXB_LACPL
9 PsiBlast_PDB 92.4748% -9 - C7 -2EZ9 6.9 POXB_LACPL
15 PsiBlast_PDB 90.3543% -15 - C7 -1V5G 7.9 ?
46 Fugue 89.3148% -12 - C7 -1POX 7.7 POXB_LACPL