@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZF2: (2018-01-14 )
MNIEKMTTTLQEAIAEAQQIAVTRKHQDIDIAHVWKIFLQSNHFGRNFYTDAGLDVESFEHEIDRLLDEYPVVSGGNVQYGQNLSQNFFRLLNEADQIRESFGDEFLSTEVVILALMKLKNYPLTVYLNKNGLSEKELRKNIEEMRGGERVTSQNQEEQYKALEKYGVDLVQQVKSGKMDPIIGRDEEIRDVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVRKDVPENLKDKTIFSLDMGALIAGAKFRGEFEERLKAVLKEVKKSDGRILLFIDEIHNIVGAGKTEGSMDAGNLLKPMLARGELHLIGATTLDEYRQYMEKDKALERRFQKVLVKEPTVEDTISILRGLKERFEIHHGVNIHDNALVAAATLSDRYITDRFLPDKAIDLIDEASATIRVEMNSMPTELDQVTRRLMQLEIEEAALKKESDDASKKRLKNLQEELAELREEANAMKMQWETEKEEVNSVSAKRAEIDKAKHELEDAENNYDLERAAVLRHGTIPQLEKELKELEAKAKDSEIKMVQESVTENEIAQVVGRLTGIPVTKLVEGEREKLIKLNETLHKRVIGQDEAVDAVSDAVIRSRAGLQDPNRPLGSFLFLGPTGVGKTELAKALAENLFDSEDHMVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEAVRRNPYTIVLLDEIEKAHPDVFNILLQVLDDGRLTDSKGRVVDFKNTVLIMTSNIGSQLLLEGVTADGTIPEAVAEQVNTLLRGNFKPEFLNRIDDTILFTPLSLDNVKGIVDKMVAQLAQRLEHQEILLTISDEAKTWIAENAYEPAYGARPLKRFITKEVETPLAKEIVAGHVMPKSKVTITLLDGQLHFKTEELEEIV

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_2(4LJA)

[Raw transfer]




ACP_A_2(4LJ9)

[Raw transfer]




ACP_A_2(4LJ9)

[Raw transfer]




MNT_C_8(4LJ7)

[Raw transfer]




ADP_A_2(4LJ5)

[Raw transfer]




ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]




MNT_B_6(4LJ7)
CLPB_THET8
[Raw transfer]




MNT_A_4(4LJ7)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FCV)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FD2)
CLPB_THET8
[Raw transfer]




ADP_A_4(4FCW)
CLPB_THET8
[Raw transfer]




ADP_D_6(4FD2)

[Raw transfer]




ADP_B_5(4FD2)
CLPB_THET8
[Raw transfer]




98 Fugue 97.8554% 0 - C- -1QVR - CLPB_THET8 -
109 HHSearch 73.5046% 35 - C2 -3J3U - CLPC_BACSU -
4 PsiBlast_PDB 73.0244% 42 - C2 -3J3U - CLPC_BACSU -
3 PsiBlast_PDB 71.9644% 41 - C2 -3J3R - CLPC_BACSU -
2 PsiBlast_PDB 71.5844% 41 - C2 -3J3T - CLPC_BACSU -
1 PsiBlast_PDB 70.1144% 47 - C2 -3J3S - CLPC_BACSU -
110 HHSearch 69.4146% - - C2 -3PXI - CLPC_BACSU -
6 PsiBlast_PDB 68.6541% - - C2 -3PXI - CLPC_BACSU -
25 PsiBlast_CBE 65.9461%-151 - C2 -4LJ7 6.7 CLPB_THET8
10 PsiBlast_PDB 65.5561%-148 - C2 -4LJ7 9.3 CLPB_THET8
22 PsiBlast_CBE 65.3440% 41 - C2 -5KNE - HS104_YEAST -
115 HHSearch 64.5761%-143 - C2 -4FCV 6.6 CLPB_THET8
24 PsiBlast_CBE 64.5261%-156 - C2 -4LJ7 7.3
9 PsiBlast_PDB 64.0661%-141 - C2 -4LJ5 6.6
16 PsiBlast_PDB 63.8859%-154 - C2 -4FCW 7.5 CLPB_THET8
21 PsiBlast_CBE 63.4040% -11 * C2 *5KNE - HS104_YEAST -
8 PsiBlast_PDB 63.3861%-139 - C2 -4LJ4 - -
15 PsiBlast_PDB 62.9159%-144 - C2 -4FCV 6.6 CLPB_THET8
14 PsiBlast_PDB 62.8060%-151 - C2 -4FD2 6.5 CLPB_THET8
27 PsiBlast_CBE 62.7960%-153 - C2 -4FD2 6.3 CLPB_THET8
113 HHSearch 62.7761%-128 - C2 -4LJ9 6.7
11 PsiBlast_PDB 62.6061%-128 - C2 -4LJ9 6.7
26 PsiBlast_CBE 62.5960%-152 - C2 -4FD2 6.0
12 PsiBlast_PDB 61.9961%-137 - C2 -4LJA 7.2