@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZK4: (2018-01-15 )
MSNRMILNETSYFGKGAIESIVPEFQQRGFGKAAVITDKGLIEHGIATKVTELLDKAAIAYALYDGIVPNPTIQNVKDGVAFVKEAEADCLIAIGGGSPIDTAKAIGIILTNPEFSDVISLEGVADTKNPCLPILAIPTTSGTAAEVTINYVITDEVNHRKFVCVDPHDIPIVAFIDSDMMMGMPKKLAASTGMDAMTHAIEGFITKGAWEMTDMLHLKAIEIIGHSLEVSVDGDQNGREKMALGQYIAGMGFSNVGLGLVHGMAHPLSAWYNIPHGVACAALLPTVMKYNKEYTGEKYREIALVLGIKGAAEMSLEDVREAACGEIDRLSKAVGIPETISELGVKEADIPAIAEDALRDVCTPGNPRETTVEEIIALYQSLM

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_7(2BI4)
FUCO_ECOLI
[Raw transfer]




NAD_A_4(2BI4)
FUCO_ECOLI
[Raw transfer]




NAD_B_7(2BL4)
FUCO_ECOLI
[Raw transfer]




NAD_A_4(2BL4)
FUCO_ECOLI
[Raw transfer]




NAD_B_10(5BR4)
FUCO_ECOLI
[Raw transfer]




NAD_A_4(5BR4)
FUCO_ECOLI
[Raw transfer]




NAD_B_10(5BR4)
FUCO_ECOLI
[Raw transfer]




APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]




APR_A_7(1RRM)
FUCO_ECOLI
[Raw transfer]




GOL_B_11(5BR4)
FUCO_ECOLI
[Raw transfer]




GOL_A_5(5BR4)
FUCO_ECOLI
[Raw transfer]




1 PsiBlast_PDB 99.0562%-115 - C4 -2BI4 8.3 FUCO_ECOLI
22 PsiBlast_CBE 98.5362%-112 - C4 -2BI4 8.3 FUCO_ECOLI
21 PsiBlast_CBE 97.5262%-113 - C4 -2BL4 9.1 FUCO_ECOLI
40 HHSearch 97.2163%-113 - C4 -5BR4 10.8 FUCO_ECOLI
39 HHSearch 97.2063%-109 - C4 -1RRM 8.3 FUCO_ECOLI
2 PsiBlast_PDB 97.0262%-110 - C4 -2BL4 8.5 FUCO_ECOLI
23 PsiBlast_CBE 96.7762%-111 - C4 -5BR4 10.8 FUCO_ECOLI
3 PsiBlast_PDB 96.7362%-110 - C4 -5BR4 11.2 FUCO_ECOLI
4 PsiBlast_PDB 95.7560%-107 - C4 -1RRM 8.3 FUCO_ECOLI
37 HHSearch 76.3539% -67 - C4 -3OX4 - ADH2_ZYMMO -
5 PsiBlast_PDB 75.9539% -80 - C4 -3OWO - ADH2_ZYMMO -
38 HHSearch 75.2841% -63 - C4 -3BFJ - DHAT_KLEPN -
26 PsiBlast_CBE 74.7539% -77 - C4 -3OX4 - ADH2_ZYMMO -
25 PsiBlast_CBE 74.1139% -76 - C4 -3OX4 - ADH2_ZYMMO -
6 PsiBlast_PDB 74.1139% -77 - C4 -3OX4 - ADH2_ZYMMO -
24 PsiBlast_CBE 73.6539% -72 - C4 -3OX4 - ADH2_ZYMMO -
41 HHSearch 67.2238% -11 - C4 -4FR2 - ? -
7 PsiBlast_PDB 65.6540% -3 - C4 -3BFJ - DHAT_KLEPN -
8 PsiBlast_PDB 65.0137% -8 - C4 -4FR2 - ? -
11 PsiBlast_PDB 61.1826% -71 - C4 -3JZD - ? -