@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZT0: (2018-01-16 )
MIFVPNENHDPRINLAIEQYLLQEMPLDEPILLFYINEPSIIIGRNQNTLEEINRDYVEENGIHVVRRLSGGGAVYHDFGNLNFSFIMPDDGDSFRDFAKVTQPIIQALHELGVAGAELKGRNDLVIDGMKFSGNAMYATNGRMFAHGTIMFDSDINEVVNALKVKKDKIESKGIKSIRSRVTNIKPFLPEEKQKMTTEEFRQEILLKIFGVESVEEVKTYELTDEDWKKINRISEEYYRNWDWNYGKSPDFNFSRQKRFSIGSIEVHLNVSEGMIKEAKIFGDFFGLGDISDVEKKLVGQKYDKASLSKIVSQIDVKKYFGAIEPEELLTLLY

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAQ_B_4(5ICL)
?
[Raw transfer]




LAQ_A_3(5ICL)
?
[Raw transfer]




LAQ_B_4(5ICL)
?
[Raw transfer]




SH5_A_3(5ICH)
?
[Raw transfer]




SH5_B_4(5ICH)
?
[Raw transfer]




LAQ_A_2(3A7R)
LPLA_ECOLI
[Raw transfer]




LAQ_A_2(3A7R)
LPLA_ECOLI
[Raw transfer]




ATP_A_3(2ARU)
LPLAN_THEAC
[Raw transfer]




AMP_A_6(3A7A)
LPLA_ECOLI
[Raw transfer]




LPA_A_2(5IBY)
?
[Raw transfer]




AMP_C_8(3A7A)
LPLA_ECOLI
[Raw transfer]




LPA_A_2(5IJ6)
?
[Raw transfer]




SH6_A_2(5IDH)
?
[Raw transfer]




LPA_A_2(5IJ6)
?
[Raw transfer]




SH6_A_2(5IDH)
?
[Raw transfer]




MPD_A_4(3R07)
LPLAN_THEAC
[Raw transfer]




EDO_A_11(1VQZ)
?
[Raw transfer]




37R_B_6(4TVY)
LPLA_ECOLI
[Raw transfer]




EDO_A_16(1VQZ)
?
[Raw transfer]




EDO_A_16(1VQZ)
?
[Raw transfer]




2 PsiBlast_PDB 99.1481%-116 - C1 -5ICH 9.1 ?
21 PsiBlast_CBE 99.0381%-114 - C1 -5ICL 8.6 ?
1 PsiBlast_PDB 98.2981%-116 - C1 -5IBY 4.1 ?
3 PsiBlast_PDB 96.9881%-118 - C1 -5ICL 8.7 ?
4 PsiBlast_PDB 96.9381%-118 - C1 -5IDH 4.3 ?
22 PsiBlast_CBE 95.8781%-120 - C1 -5ICH 9.3 ?
37 HHSearch 85.5981% -12 - C1 -5ICL 8.6 ?
38 HHSearch 82.5381% -9 - C1 -5IDH 4.3 ?
40 HHSearch 81.4948% -98 - C1 -1VQZ 3.0 ?
6 PsiBlast_PDB 80.9848% -94 - C1 -1VQZ 3.0 ?
5 PsiBlast_PDB 78.6745% -62 - C1 -5IJ6 4.3 ?
39 HHSearch 73.2246% -23 - C1 -5IJ6 4.3 ?
41 HHSearch 63.3733% -32 - C1 -1X2G - LPLA_ECOLI -
42 HHSearch 61.4233% -27 - C1 -3A7R 10.0 LPLA_ECOLI
24 PsiBlast_CBE 59.3533% -42 - C1 -4TVY 3.3 LPLA_ECOLI
9 PsiBlast_PDB 58.5333% -31 - C1 -1X2G - LPLA_ECOLI -
25 PsiBlast_CBE 57.5233% -20 - C1 -4TVW - LPLA_ECOLI -
11 PsiBlast_PDB 57.2233% -15 - C1 -4TVW - LPLA_ECOLI -
7 PsiBlast_PDB 56.9734% -16 - C1 -3A7A 6.3 LPLA_ECOLI
8 PsiBlast_PDB 56.7934% -13 - C1 -3A7R 10.0 LPLA_ECOLI
23 PsiBlast_CBE 55.2234% -7 - C1 -3A7A 5.3 LPLA_ECOLI