@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZW5: (2018-01-17 )
MRRLKKIRLIFLLGIAFLALAGCKGNGLANEDILERSKSTNEIIWGVKYDTRLFGMMDIESRTVQGFDVDIAKAITKKILGDNGKTEFVEVTSKTRIPLLKNGNIDAIIATMTITDERKKQVDFSDVYFDAGQALLVKKGSQIKSVDDLNASTTVLAVKGSTSAANIRQHAPDAKILELENYAEAFTALQSGQGDAMTTDNAILLGIADENPEYELVGGTFTNEPYGIAINKGQENFLKAVNQALEEMHADGTYDKIYQKWFPNETEGKVE

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GGL_B_5(5EYF)
?
[Raw transfer]



GGL_A_3(5EYF)
?
[Raw transfer]



ASP_B_4(2V25)
PEB1A_CAMJE
[Raw transfer]



ASP_A_3(2V25)
PEB1A_CAMJE
[Raw transfer]



ARG_A_2(4ZV1)
?
[Raw transfer]



GLN_A_2(4ZV2)
?
[Raw transfer]



HIS_B_11(2Q2C)
?
[Raw transfer]



HIS_D_13(2Q2C)
?
[Raw transfer]



MES_B_15(4KPT)
?
[Raw transfer]
1 PsiBlast_PDB 98.9497% -97 - C3 -5EYF 4.7 ?
21 PsiBlast_CBE 97.2497% -94 - C3 -5EYF 4.7 ?
53 HHSearch 90.2699% -33 - C3 -5EYF - ? -
44 HHSearch 66.2529% -64 - C3 -1XT8 - ? -
52 HHSearch 61.7627% -71 - C3 -3KZG - ? -
27 PsiBlast_CBE 61.2035% -88 - C3 -1XT8 - ? -
56 HHSearch 60.9023% -24 - C3 -4POW - NOCT_AGRFC -
25 PsiBlast_CBE 60.2935% -61 - C3 -2YJP - ? -
26 PsiBlast_CBE 60.1335% -61 - C3 -2YJP - ? -
10 PsiBlast_PDB 59.8435% -82 - C3 -1XT8 - ? -
9 PsiBlast_PDB 59.7735% -59 - C3 -2YJP - ? -
54 HHSearch 59.0721% -32 - C3 -3KBR - PHEC_PSEAE -
4 PsiBlast_PDB 58.3236% -22 - C3 -2V25 4.4 PEB1A_CAMJE
22 PsiBlast_CBE 58.2336% -20 - C3 -2V25 4.4 PEB1A_CAMJE
55 HHSearch 57.4623% -23 - C3 -4P0I - NOCT_AGRFC -
59 HHSearch 56.4025% -53 * C3 *2Y7I - ? -
58 HHSearch 56.3529% 37 - C3 -2IA4 - ? -
34 PsiBlast_CBE 56.0432% -61 - C3 -2PYY - ? -
42 HHSearch 55.7531% 12 - C3 -2YJP - ? -
2 PsiBlast_PDB 55.6850% 10 - C3 -4ZV1 4.1 ?
3 PsiBlast_PDB 55.3850% 13 - C3 -4ZV2 3.8 ?
38 PsiBlast_CBE 45.0131% -29 - C3 -4KPT 2.4 ?