@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3XZX7: (2018-01-17 )
MKTLKEPTAEEIKKKRIYAEWGLTDEEYRMIEEDILGRMPNYTETGLFSVMWSEHCSYKNSKPVLRKFPTSGPHVLQGPGEGAGIVDIGDGLAVVFKAESHNHPSAVEPYEGAATGVGGIIRDIFSMGARPIALLDSLRFGELDNPRTKYLLEEVVAGIGGYGNCIGIPTVGGEIAFDPCYEGNPLVNAMCVGLIEHKHIQKGQAAGVGNSIMYVGAKTGRDGIHGATFASEEFNQEEEQQRSAVQVGDPFMEKLLLEACLELILHHSDSLIGIQDMGAAGLVSSSAEMASKAGSGLILTLDEVPQRETGMTPYEMMLSESQERMLICVKSGEEEKIQELFQKYDLDAVTIGKVTDDGQYRLYHQGEEVANLPVDALAEDAPVYHKEMKEPARIVEFQQLAPYQPVIEEPGQVLLDLLQQPTIASKRSIYETYDSQVQTNTVVRPGSDAAVMRVRGTNKALAMTTDCNARYLYLDPKIGGQIAVAEAARNIIASGGKPLAITDCLNYGSPDKPEVFWELSTSADGIAAACETLGTPVISGNVSLYNETDGQAIYPTPMIGMVGLIEDHKHITTQEFKKSGDLIYILGKTFADFDGSELQKMQLGRIEGVIRNFDLSIEKRNQELVLTAIQNGLIESAHDCSEGGLAIALAESAFKHQLGISVQFELSSAQLFAETQSRFVLTVAPENKTRFEEMMGDAAVLAGKVTDEAIIEISATDGQIKIETAVARKCWEDAIVCLMK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_A_6(2HS4)
PURL_THEMA
[Raw transfer]




ACP_A_5(2HRY)
PURL_THEMA
[Raw transfer]




ADP_A_2(3VIU)
PURL_THET8
[Raw transfer]




ATP_A_5(2HS0)
PURL_THEMA
[Raw transfer]




ADP_A_5(2HRU)
PURL_THEMA
[Raw transfer]




FGR_A_3(2HS3)
PURL_THEMA
[Raw transfer]




FGR_A_3(2HS3)
PURL_THEMA
[Raw transfer]




1 PsiBlast_PDB 93.5548% -41 - C3 -3VIU 4.9 PURL_THET8
25 HHSearch 81.5639% -71 - C3 -2HS3 5.2 PURL_THEMA
4 PsiBlast_PDB 73.8440% -37 - C3 -2HS4 4.6 PURL_THEMA
6 PsiBlast_PDB 73.1940% -47 - C3 -2HRY 5.3 PURL_THEMA
3 PsiBlast_PDB 72.9440% -34 - C3 -2HS3 5.2 PURL_THEMA
2 PsiBlast_PDB 72.5040% -46 - C3 -2HS0 4.7 PURL_THEMA
5 PsiBlast_PDB 71.8740% -43 - C3 -2HRU 4.8 PURL_THEMA
22 HHSearch 70.6724% 11 - C3 -4LGY - PUR4_SALTY -
23 HHSearch 69.0824% 11 - C3 -3UJN - PUR4_SALTY -
7 PsiBlast_PDB 67.6725% 26 - C3 -3UGJ - PUR4_SALTY -
9 PsiBlast_PDB 67.2925% 30 - C3 -1T3T - PUR4_SALTY -
8 PsiBlast_PDB 67.0625% 28 - C3 -4R7G - PUR4_SALTY -
12 PsiBlast_PDB 66.9225% 31 - C3 -4MGH - PUR4_SALTY -
14 PsiBlast_PDB 66.8824% 28 - C3 -4LGY - PUR4_SALTY -
13 PsiBlast_PDB 66.7825% 30 - C3 -4L78 - PUR4_SALTY -
11 PsiBlast_PDB 66.4525% 29 - C3 -3UMM - PUR4_SALTY -
10 PsiBlast_PDB 66.0725% 28 - C3 -3UJN - PUR4_SALTY -
47 HHSearch 47.6021% -36 - C3 -2HS3 - PURL_THEMA -
30 HHSearch 40.4620% -0 - C3 -3U0O - SELD_ECOLI -
29 HHSearch 39.8420% 3 - C3 -3U0O - SELD_ECOLI -