@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y058: (2018-01-18 )
MYLKRIEIAGFKSFADKTVIDFENSVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGKMPDIIFAGSDTRKQLNIAEVTVILDNSDHYLPLEYNEISVTRRYRRTGESEFFINKQSCRLKDIQELFLDSGLGKESFSIISQGKVEAIFSSKPEDRRGIFEEAAGVLKYKQRKKKAEQKLFETEDNLSRVQDIIHELEEQLTPLAAQSEAAKEFLRLKETLTQTDVSLMVAEIKTAKKDWDNKQAQLAKFNLELGKLSESIQEQESILAKQRKENAQADRLIEKNQQVLLDLSEKLKQTEGQKDVLQERTKHTQKSSQEYQTSLAEAQKKVKHFEKLQESLMKAAAEKETEIQKAEANLIKTQQELEKYQKSTKELLAELRDQYVDLMQEQAAVGNELKYLERQYIQETAKSKQTLAKQSEVEASVDRLILQKEELTQKQAQLKSSLTETKEKLEMIQQNGKKFQEALAKEQPKMYQLMNQVQQLRARKKSLQEIQENYFGFYQGVRLVLQHKQQLSGIVGAVAELIDVPADFTLAIEAALGGAAQHVIVENEKDARQAITYLKQQRGGRATFLPLTTIKPRQLPAHILTQAAAVEGFIGIASEQVSYPDQIQTVVQNLLGTILLAKDLTSANAIAQTIRYQYRVVSLEGDVMNAGGSMTGGANKRGNQGSLFVQNQELKRLTSEFEEADKQLQAQEKKVQELQQETARLAEEQEVLRTRGEQLRFEEQEATNQLQNIINELERFEKEKQISTFETRELQQFIEDYEKQTNELKDKQTDLESQRQKIDEEIKSLSQESDQMEARRAQVQSQKAQEQADLAVLKEQFNHLQIQLRGARVQKAEATERQEAIEKQLATLTADFSDHEVTEESLEKQINELSAQRETLKAELAKAKEQRDRRQKEIDKLEAVLAERNREQKARLSEQSKLEVQKDRAEMILDNHLTYLQSEYQLTFEKASQDYQETTDIEDSRTKVSSLKEQIEKLGPVNLNSIEQYEQVSERHTFLATQRDDLLAAKNQLFETMDEMDDEVRTRFKEVFEAIRQEFKIVFPNMFGGGKAELVLTEPTDLLKTGIEIEVQPPGKKLQSLSLLSGGERALTAIALLFSIIRVCPVPFCILDEVEAALDEANVKRFGRYLSDFQDDTQFIVVTHRKGTMVAADVLYGVTMQESGVSKIVSVRMEDINEEAKINETKV

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_4(1XEX)
?
[Raw transfer]



AP5_C_7(3KTA)
?
[Raw transfer]



ADP_A_3(3AUY)
?
[Raw transfer]



ADP_B_5(3AUY)
?
[Raw transfer]



ATP_A_4(5H67)
SMC_BACSU
[Raw transfer]



ATP_A_4(5H67)
SMC_BACSU
[Raw transfer]



AGS_B_9(5DAC)
?
[Raw transfer]



AGS_B_5(5H68)
?
[Raw transfer]



ATP_A_4(5H67)
?
[Raw transfer]
85 HHSearch 82.6776% -93 - C2 -5H67 6.4 SMC_BACSU
2 PsiBlast_PDB 82.1975% -93 - C2 -5H67 6.4 SMC_BACSU
1 PsiBlast_PDB 80.6775%-110 - C2 -5H66 - ? -
84 HHSearch 80.4976%-110 - C2 -5H66 - ? -
3 PsiBlast_PDB 76.5344% -75 - C4 -5H69 - ? -
97 HHSearch 70.5343%-168 - C4 -5H69 - ? -
21 PsiBlast_CBE 70.2365%-122 - C2 -5H67 2.9 ?
4 PsiBlast_PDB 68.9439%-119 - C2 -5XEI - ? -
16 PsiBlast_PDB 67.9725% 9 - C4 -4U4P - SMC2_HUMAN -
89 HHSearch 65.4535% -4 - C2 -5XEI - ? -
107 Fugue 64.0631%-180 - C4 -1GXJ - ? -
9 PsiBlast_PDB 61.9830% -0 - C4 -1GXL - ? -
109 Fugue 61.8717% -0 - C2 -4UX3 - SMC3_YEAST -
10 PsiBlast_PDB 61.0330% -89 - C4 -1GXJ - ? -
11 PsiBlast_PDB 60.9630% -83 - C4 -1GXK - ? -
101 HHSearch 60.3530%-180 * C4 *1GXJ - ? -
86 HHSearch 60.1034% -8 - C2 -3KTA 7.7 ?
106 Fugue 60.0530% 11 - C2 -1E69 - ? -
14 PsiBlast_PDB 59.1034% -38 - C- -3NWC - SMC_PYRFU -
22 PsiBlast_CBE 58.6634% -8 - C2 -1XEX 8.5 ?
105 HHSearch 45.1675%-166 - C2 -5H68 6.9 ?
102 HHSearch 42.6343%-167 * C2 *3AUY 5.5 ?
103 HHSearch 41.1643%-170 - C2 -3AUY 6.0 ?