@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y063: (2018-01-19 )
MTELITIKDLKVHYPIRSGFFNRVTDHVYAVDGVDFIIEKGKTYGLVGESGSGKSTTGKAVVGLEKVTAGQIMYEGKDVTKRSNRKKMGYNKDVQMIFQDSMSSLNPKKRVLDIIAEPIRNFERLSDQEEKKKVKGLLDIVGMPEDALYKYPHEFSGGQRQRLGVARAVATNPKLIVADEPVSALDLSVQAQVLNFMKRIQQEYGLSYLFISHDLGVVKHMCDNIAIMYKGRFVEIGTREDIYNDPRHIYTKRLLSAIPQIDVENRESHKENRRRVEQEYIQNQKEYYDATGRVYDLRTITTTHKVALKDGGAS

Atome Classification :

(36 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_6(4YMV)
?
[Raw transfer]



ACP_A_4(4AYT)
ABCBA_HUMAN
[Raw transfer]



ATP_J_5(4YMV)
?
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



AGS_B_6(3C4J)
?
[Raw transfer]



ATP_A_7(4YMU)
?
[Raw transfer]



AGS_A_4(3C4J)
?
[Raw transfer]



ANP_K_6(3C41)
?
[Raw transfer]



ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]



128_A_2(2PMK)

[Raw transfer]



ADP_A_5(2Q0H)
?
[Raw transfer]



ADP_B_6(2OLJ)
?
[Raw transfer]



ADP_A_5(2OLJ)
?
[Raw transfer]



ATP_C_3(1VCI)
?
[Raw transfer]



AT4_B_6(2OLK)
?
[Raw transfer]



AT4_D_8(2OLK)
?
[Raw transfer]



AT4_C_7(2OLK)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]
54 Fugue 82.1126%-126 - C1 -3TUZ - METN_ECOLI -
64 HHSearch 81.3531%-134 - C1 -3DHW - METN_ECOLI -
68 HHSearch 81.3431%-134 * C1 *3TUI - METN_ECOLI -
55 Fugue 80.9925% -92 - C1 -1OXS - ? -
2 PsiBlast_PDB 79.7831%-129 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 78.9431%-137 - C1 -3TUZ - METN_ECOLI -
57 Fugue 78.6725% -87 - C1 -1Z47 - ? -
25 PsiBlast_CBE 78.2331%-130 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 77.9431%-135 - C1 -3TUJ - METN_ECOLI -
22 PsiBlast_CBE 77.3831%-132 - C1 -3TUZ - METN_ECOLI -
26 PsiBlast_CBE 77.3731%-126 - C1 -3TUI - METN_ECOLI -
23 PsiBlast_CBE 76.7431%-128 - C1 -3TUZ - METN_ECOLI -
63 HHSearch 76.4626% -11 - C1 -4FWI - ? -
72 HHSearch 76.2032%-131 - C1 -4TQU - ? -
70 HHSearch 75.4630%-120 - C1 -1OXU - ? -
24 PsiBlast_CBE 75.2331%-135 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 75.1731%-131 - C1 -3TUZ - METN_ECOLI -
7 PsiBlast_PDB 74.1930%-121 - C1 -1OXU - ? -
5 PsiBlast_PDB 73.4230%-119 - C1 -1OXS - ? -
82 HHSearch 73.3430%-120 - C1 -1Z47 - ? -
12 PsiBlast_PDB 66.8130%-131 - C1 -1VCI 2.8 ?
36 PsiBlast_CBE 65.3333% -30 - C1 -2OLK 4.0 ?
34 PsiBlast_CBE 65.1833% -31 - C1 -2OLK 4.0 ?
15 PsiBlast_PDB 64.1733% -25 - C1 -2OLJ 3.9 ?
35 PsiBlast_CBE 63.6633% -28 - C1 -2OLK 4.2 ?
16 PsiBlast_PDB 63.5233% -28 - C1 -2OLK 3.9 ?
29 PsiBlast_CBE 62.9133% -29 - C1 -3C41 4.0 ?
19 PsiBlast_PDB 62.3133% -26 - C1 -3C4J 4.7 ?
28 PsiBlast_CBE 62.3033% -26 - C1 -3C4J 3.2 ?
46 PsiBlast_CBE 62.2733% -22 - C1 -4YMU 4.3 ?
20 PsiBlast_PDB 61.9533% -24 - C1 -3C41 5.0 ?
44 PsiBlast_CBE 61.8733% -26 - C1 -4YMV 3.6 ?
37 PsiBlast_CBE 61.7533% -24 - C1 -2OLJ 3.7 ?
18 PsiBlast_PDB 61.7433% -22 - C1 -2Q0H 3.3 ?
43 PsiBlast_CBE 61.3833% -25 - C1 -4YMV 5.9 ?
45 PsiBlast_CBE 60.9033% -25 - C1 -4YMU 4.8 ?