@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0E0: (2018-01-20 )
MVKVEVKHLTKIFGKKTQAALDMMNDHQPKTEILKKTGATVGVYDVNFDVKEGEIFVIMGLSGSGKSTLIRLLNRLIEPTSGSIYIDGEDVSKLSKEELREVRRHKINMVFQNFGLFPHRTILENTEYGLEVRGVPKEERQEKAEKALENSSLLSFKDQYPSQLSGGMQQRVGLARALANDPEILLMDEAFSALDPLIRREMQDELLDLQANVQKTIIFITHDLNEALRIGDRIALMKDGEIMQIGTGEEILTNPANDYVREFVEEVDRSKVLTAQNIMVPALTTNIESDGPNVALTRMRNEEVSMLMAVDRKRHLKGIITADQALEARKQKRPLIDFLDENVTVIGKDMVVSDIFNIIYDSPTPLAVVEDGKLKGVVIRGSVIEALAETSEVSEHE

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_F_6(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_E_5(2FGJ)
HLYBP_ECOLX
[Raw transfer]




ATP_G_7(2FGK)
HLYBP_ECOLX
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_H_8(2FGK)

[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_A_5(1L2T)
Y796_METJA
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_H_8(2FGJ)

[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_F_6(2FGJ)
HLYBP_ECOLX
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_G_7(2FGJ)
HLYBP_ECOLX
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_B_2(2FF7)

[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ADP_A_3(3TIF)
Y796_METJA
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




146 Fugue 85.6829%-123 - C1 -3TUZ - METN_ECOLI -
167 HHSearch 83.2541%-116 - C1 -2IT1 - ? -
4 PsiBlast_PDB 78.0136%-123 - C1 -1V43 - ? -
1 PsiBlast_PDB 77.3240%-115 - C1 -2IT1 - ? -
165 HHSearch 77.2839%-108 - C1 -2D62 - ? -
157 HHSearch 76.4139%-120 - C1 -2YYZ - ? -
3 PsiBlast_PDB 76.2636%-121 - C1 -1VCI - ? -
164 HHSearch 76.0939%-115 - C1 -1Z47 - ? -
166 HHSearch 75.9338%-126 - C1 -3TUI - METN_ECOLI -
12 PsiBlast_PDB 75.4339%-133 - C1 -3TUZ - METN_ECOLI -
153 HHSearch 75.1335%-129 - C1 -3RLF - MALK_ECOLI -
160 HHSearch 74.9135%-118 - C1 -1OXU - ? -
162 HHSearch 74.6838%-115 - C1 -1Z47 - ? -
30 PsiBlast_CBE 74.4339%-127 - C1 -3TUI - METN_ECOLI -
154 HHSearch 74.2435%-125 - C1 -2AWN - MALK_ECOLI -
147 Fugue 74.1128% -73 - C1 -1OXS - ? -
28 PsiBlast_CBE 74.0139%-139 - C1 -3TUI - METN_ECOLI -
156 HHSearch 73.6934%-116 - C1 -1OXX - ? -
2 PsiBlast_PDB 73.1434% -92 - C1 -1Z47 - ? -
11 PsiBlast_PDB 73.0139%-126 - C1 -3TUI - METN_ECOLI -
24 PsiBlast_CBE 72.2443% -30 - C1 -4YMU 5.4 ?
23 PsiBlast_CBE 70.9043% -29 - C1 -4YMV 4.3 ?
7 PsiBlast_PDB 70.7843% -26 - C1 -4YMU 5.4 ?
8 PsiBlast_PDB 69.7543% -28 - C1 -4YMV 6.9 ?
88 PsiBlast_CBE 61.1041% -28 - C1 -3FVQ 5.4 FBPC_NEIG1
89 PsiBlast_CBE 58.7041% -30 - C1 -3FVQ 4.6 FBPC_NEIG1
13 PsiBlast_PDB 57.1644% -15 - C1 -4U00 4.3 ?
52 PsiBlast_CBE 55.5045% -26 - C1 -3TIF 4.1 Y796_METJA
51 PsiBlast_CBE 55.3745% -25 - C1 -3TIF 4.3 Y796_METJA
54 PsiBlast_CBE 55.1945% -23 - C1 -1L2T 4.3 Y796_METJA
53 PsiBlast_CBE 54.9045% -27 - C1 -1L2T 4.5 Y796_METJA
145 PsiBlast_CBE 37.4333% -30 - C1 -2FGJ 5.6 HLYBP_ECOLX
133 PsiBlast_CBE 36.7933% -46 - C1 -2PMK 5.2
134 PsiBlast_CBE 36.6333% -43 - C1 -2FF7 4.9
142 PsiBlast_CBE 36.5733% -31 - C1 -2FGJ 5.4
139 PsiBlast_CBE 36.0033% -36 - C1 -2FGK 5.9 HLYBP_ECOLX
138 PsiBlast_CBE 35.5033% -35 - C1 -2FGK 5.7 HLYBP_ECOLX
137 PsiBlast_CBE 34.4533% -35 - C1 -2FGK 6.1
143 PsiBlast_CBE 34.1833% -26 - C1 -2FGJ 5.6 HLYBP_ECOLX
144 PsiBlast_CBE 33.9133% -32 - C1 -2FGJ 6.0 HLYBP_ECOLX
140 PsiBlast_CBE 32.9733% -36 - C1 -2FGK 6.0 HLYBP_ECOLX
136 PsiBlast_CBE 32.8133% -36 - C1 -3B5J 5.2