@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0K9: (2018-01-21 )
MIDAKKLRNDFPILFQDVNDEPLVYLDNAATTQKPKQVLQALAYYYEHDNANVHRGVHTLAERATHDYEQAREKVRAFIHAKETAEVLFTRGTTTSLNWVARTFGDRYIKAGDEIVLSYMEHHSNVIPWQQLAKRTGAVLKYIELTEEGFLDMEDAAKKITDKTKIVSIAHVSNVLGVFNPVQELAELVHENGGVIVVDGAQSAPHMAIDVQALDCDFFAFSGHKMCGPTGIGVLYGKRKWLEEMEPVEFGGEMIDFVELYDSTWKELPWKFEAGTPNIAGAIALGHAIDYLQKLGMDNIHRYEEELAAYVLPKLQAIDGLTVYGPQDPNFRTGVVAFNLDGLHPHDVATALDMEGVAVRAGHHCAQPLLKYLEVSATARASFYFYNTTQDADRLVEAIMATKEFFQHGTI

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CIT_B_12(5FT4)
CSDA_ECOLI
[Raw transfer]




CIT_A_6(5FT4)
CSDA_ECOLI
[Raw transfer]




GOL_B_7(4LW2)
CSDA_ECOLI
[Raw transfer]




LPG_C_3(1I29)
SUFS_ECOLI
[Raw transfer]




ALA_B_6(5B87)
?
[Raw transfer]




ACY_E_5(1C0N)
SUFS_ECOLI
[Raw transfer]




GOL_B_13(5FT6)
CSDA_ECOLI
[Raw transfer]




CYS_E_5(1ECX)
?
[Raw transfer]




PLP_B_5(1T3I)
CSD_SYNY3
[Raw transfer]




CYS_F_6(1ECX)
?
[Raw transfer]




PLP_A_2(5J8Q)
SUFS_BACSU
[Raw transfer]




PLP_B_17(5FT5)
CSDA_ECOLI
[Raw transfer]




PLP_A_3(1JF9)
SUFS_ECOLI
[Raw transfer]




PLP_A_10(5FT6)
CSDA_ECOLI
[Raw transfer]




PLP_A_3(1C0N)
SUFS_ECOLI
[Raw transfer]




ALA_A_3(5J8Q)
SUFS_BACSU
[Raw transfer]




PLP_A_2(5J8Q)
SUFS_BACSU
[Raw transfer]




PLP_B_6(4LW4)
CSDA_ECOLI
[Raw transfer]




PLP_B_6(4LW2)
CSDA_ECOLI
[Raw transfer]




PLP_E_5(1I29)
SUFS_ECOLI
[Raw transfer]




PLP_A_10(5FT6)
CSDA_ECOLI
[Raw transfer]




IPA_A_4(5B7U)
?
[Raw transfer]




IPA_A_4(5B7U)
?
[Raw transfer]




PLP_B_7(5FT4)
CSDA_ECOLI
[Raw transfer]




PLP_B_7(5B89)
?
[Raw transfer]




PLP_C_8(4LW2)
CSDA_ECOLI
[Raw transfer]




PLP_A_11(5FT5)
CSDA_ECOLI
[Raw transfer]




PLP_A_4(4LW2)
CSDA_ECOLI
[Raw transfer]




PLP_B_6(4LW2)
CSDA_ECOLI
[Raw transfer]




PLP_B_7(5B89)
?
[Raw transfer]




PLP_A_3(5FT4)
CSDA_ECOLI
[Raw transfer]




PLP_A_5(4LW4)
CSDA_ECOLI
[Raw transfer]




PLP_B_15(5FT6)
CSDA_ECOLI
[Raw transfer]




PLP_A_3(5B87)
?
[Raw transfer]




PLP_B_5(5B87)
?
[Raw transfer]




PLP_A_4(5B89)
?
[Raw transfer]




57 HHSearch 95.7565%-107 - C1 -5J8Q 4.5 SUFS_BACSU
1 PsiBlast_PDB 94.6164%-106 - C1 -5J8Q 4.5 SUFS_BACSU
5 PsiBlast_PDB 89.2749% -91 - C1 -5DB5 - SUFS_ECOLI -
9 PsiBlast_PDB 89.0644%-112 - C1 -4W91 - ? -
52 HHSearch 88.4145%-114 - C1 -4W91 - ? -
22 PsiBlast_CBE 87.9949% -92 - C1 -5DB5 - SUFS_ECOLI -
21 PsiBlast_CBE 87.2152% -82 - C1 -1T3I 3.3 CSD_SYNY3
3 PsiBlast_PDB 85.8749% -91 - C1 -1JF9 3.8 SUFS_ECOLI
4 PsiBlast_PDB 85.7149% -94 - C1 -1I29 4.4 SUFS_ECOLI
59 HHSearch 84.7741%-110 - C1 -4LW2 3.4 CSDA_ECOLI
55 HHSearch 84.0740%-115 - C1 -5FT6 3.1 CSDA_ECOLI
41 PsiBlast_CBE 82.2141%-109 - C1 -4LW2 3.4 CSDA_ECOLI
14 PsiBlast_PDB 81.6541%-114 - C1 -5FT4 3.6 CSDA_ECOLI
6 PsiBlast_PDB 81.4649% -95 - C1 -1C0N 3.6 SUFS_ECOLI
16 PsiBlast_PDB 81.4541%-111 - C1 -4LW2 3.2 CSDA_ECOLI
17 PsiBlast_PDB 81.1041%-115 - C1 -4LW4 3.6 CSDA_ECOLI
42 PsiBlast_CBE 80.9140%-111 - C1 -5FT6 3.5 CSDA_ECOLI
19 PsiBlast_PDB 80.7440%-113 - C1 -5FT6 3.1 CSDA_ECOLI
15 PsiBlast_PDB 79.9741%-111 - C1 -5FT8 - CSDA_ECOLI -
40 PsiBlast_CBE 79.4541%-114 - C1 -4LW2 3.2 CSDA_ECOLI
43 PsiBlast_CBE 79.3740%-112 - C1 -5FT5 3.1 CSDA_ECOLI
31 PsiBlast_CBE 79.3641%-112 - C1 -5FT4 3.4 CSDA_ECOLI
39 PsiBlast_CBE 79.1241%-111 - C1 -4LW4 3.6 CSDA_ECOLI
18 PsiBlast_PDB 78.5640%-112 - C1 -5FT5 4.5 CSDA_ECOLI
62 HHSearch 74.6944% -50 - C1 -5B7U 3.6 ?
61 HHSearch 73.8345% -50 - C1 -5B89 3.8 ?
30 PsiBlast_CBE 68.5145% -54 - C1 -5B87 3.7 ?
12 PsiBlast_PDB 67.9345% -52 - C1 -5B89 3.9 ?
13 PsiBlast_PDB 67.7245% -54 - C1 -5B7U 3.6 ?
29 PsiBlast_CBE 67.0945% -53 - C1 -5B89 3.8 ?
11 PsiBlast_PDB 65.8845% -51 - C1 -5B87 2.8 ?