@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0L8: (2018-01-21 )
MYTTLKEVTKTAEELNFTVGAFNTHNLEMLPAMLGAAKEMGSPIIIQTSVDTAKYIGMHVLVNVMTAIAEEEMVDAVLHLDHARDFDDIKEAIDSGYTSVMYDGSHLPFKENILKTKAVVEYAHAHGVSVEGELGTIGGTEEGIHVAENDKVYTRPEDAVKFVEATGVDALAIAIGTNHGQFKSKTEVNIPLLKEIDAVVDVPLVIHGGTGVKEEDYPELINNGIRKFNVGTELLVNWTKVAKETFSETEINKSLRHNVIPANEAVKEIVKHKIGLFMNLESPINLGNK

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TD4_B_10(3N9S)
?
[Raw transfer]



PH4_A_5(3C56)
ALF_HELPY
[Raw transfer]



TD4_A_3(3N9S)
?
[Raw transfer]



2FP_A_2(3ELF)
ALF_MYCTU
[Raw transfer]



PH4_B_6(3C56)
ALF_HELPY
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_A_3(1GVF)
KBAY_ECOLI
[Raw transfer]



PGH_B_12(1GVF)
KBAY_ECOLI
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



13P_A_8(3Q94)
?
[Raw transfer]



PGH_A_9(3C52)
ALF_HELPY
[Raw transfer]



13P_A_5(2FJK)
ALF_THECA
[Raw transfer]



CIT_A_3(5U7S)
?
[Raw transfer]



FMT_B_5(5U7S)
?
[Raw transfer]



G3P_A_4(3EKZ)
ALF_MYCTU
[Raw transfer]
64 HHSearch 89.9636%-104 - C4 -1GVF 3.6 KBAY_ECOLI
22 PsiBlast_CBE 88.1237%-102 - C4 -1GVF 3.6 KBAY_ECOLI
2 PsiBlast_PDB 85.9337%-107 - C4 -1GVF 3.3 KBAY_ECOLI
61 HHSearch 84.1737% 0 - C- -3N9R - ? -
3 PsiBlast_PDB 83.8738% -42 - C4 -1RV8 - ? -
63 HHSearch 83.2641% -39 - C4 -1RVG - ? -
65 HHSearch 82.9142% -35 - C4 -2FJK - ALF_THECA -
36 PsiBlast_CBE 82.2136% 0 - C- -3N9R - ? -
35 PsiBlast_CBE 82.2136% 0 - C- -3N9R - ? -
34 PsiBlast_CBE 82.2136% 0 - C- -3N9R - ? -
13 PsiBlast_PDB 82.2136% 0 - C- -3N9R - ? -
4 PsiBlast_PDB 81.5438% -40 - C4 -1RVG - ? -
5 PsiBlast_PDB 79.2739% -33 - C4 -2FJK 3.8 ALF_THECA
6 PsiBlast_PDB 78.1840% -7 - C4 -3Q94 4.5 ?
69 HHSearch 78.0338% -23 - C4 -2ISW - ? -
39 PsiBlast_CBE 77.8331% -28 - C4 -5U7S 3.1 ?
66 HHSearch 77.7240% -8 - C4 -3Q94 4.5 ?
11 PsiBlast_PDB 77.3036% -18 - C4 -3C52 3.6 ALF_HELPY
62 HHSearch 77.1237% -7 - C4 -3N9S - ? -
31 PsiBlast_CBE 76.5936% -15 - C4 -3N9S 4.2 ?
16 PsiBlast_PDB 71.6831% -20 - C4 -5U7S 5.3 ?
84 Fugue 65.3735% 33 * C4 *1GVF 3.3 KBAY_ECOLI