@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0Q4: (2018-01-21 )
MIKITFPDGAVKEFESGTTTLAIAESISKSLAKKALAGKVNGKLVDLTRPIEEDASIEIITPDHEDALGLVRHSAAHLMAQAMRRLYPNIHFGVGPAIDSGFYYDTDNGQNQVTAEDLPAIEAEMMKIVKENLPIERRVLSKQEALEIFASDPYKVELISELPEEEVITAYQQGEFIDLCRGPHVPSTGRIQVFKLLSVAGAYWRGNSNNQMMQRVYGTAFFDKKALKEYIRLREEAKERDHRKLGKELDLFMVSPEVGSGLPFWLPKGATIRRTIERYIVDKEVSLGYQHVYTPIMGDVELYKTSGHWDHYQEDMFPPMDMGDGEMLVLRPMNCPHHMMVYKNTIHSYRELPIRIAELGMMHRYEKSGALSGLQRVREMTLNDGHTFVRPDQIKDEFKRTLELMVAVYADFNITDYRFRLSYRDPNNTDKYFDDDAMWEKAQAMLKAAMDELELDYFEAEGEAAFYGPKLDVQVKTALGTEETLSTIQLDFLLPERFDLTYVGEDGENTHRPVVIHRGIVSTMERFVAYLTEVYKGAFPTWLAPIQATIIPVSVDAHGDYAYEIKERLQMKGLRVEVDDRNEKMGYKIRASQTQKIPYQLVVGDKELEDATVNVRRYGSKETAVEDLNIFIDAMEAEVKNYSREN

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




SSA_A_5(1FYF)
SYT_ECOLI
[Raw transfer]




409_A_4(4HWO)
SYT_ECOLI
[Raw transfer]




TSB_A_3(3UH0)
SYTM_YEAST
[Raw transfer]




TSB_A_6(4YYE)
SYTM_YEAST
[Raw transfer]




409_B_6(4HWO)
SYT_ECOLI
[Raw transfer]




SSA_B_6(1FYF)
SYT_ECOLI
[Raw transfer]




1B3_B_6(4HWS)
SYT_ECOLI
[Raw transfer]




1B2_A_4(4HWR)
SYT_ECOLI
[Raw transfer]




1B2_B_6(4HWR)
SYT_ECOLI
[Raw transfer]




X16_B_6(4HWP)
SYT_ECOLI
[Raw transfer]




X16_A_4(4HWP)
SYT_ECOLI
[Raw transfer]




1B3_A_4(4HWS)
SYT_ECOLI
[Raw transfer]




THR_B_5(1EVK)
SYT_ECOLI
[Raw transfer]




2CR_B_8(4P3P)
SYT_ECOLI
[Raw transfer]




2CR_A_4(4P3P)
SYT_ECOLI
[Raw transfer]




2 PsiBlast_PDB 86.7667% -81 - C2 -1NYR - SYT_STAAW -
1 PsiBlast_PDB 86.6567% -83 - C2 -1NYQ - SYT_STAAW -
87 HHSearch 85.2967% -81 - C2 -1NYQ - SYT_STAAW -
22 PsiBlast_CBE 85.0067% -82 - C2 -1NYQ - SYT_STAAW -
86 HHSearch 84.0467% -75 - C2 -1NYR - SYT_STAAW -
21 PsiBlast_CBE 83.8167% -76 - C2 -1NYR - SYT_STAAW -
3 PsiBlast_PDB 72.8341% -20 - C1 -1QF6 - SYT_ECOLI -
10 PsiBlast_PDB 60.6940% -99 - C2 -4HWR 5.2 SYT_ECOLI
30 PsiBlast_CBE 60.3240% -98 - C2 -1FYF 6.4 SYT_ECOLI
34 PsiBlast_CBE 60.1340% -98 - C2 -1EVK 3.2 SYT_ECOLI
5 PsiBlast_PDB 60.1140% -99 - C2 -1EVL - SYT_ECOLI -
36 PsiBlast_CBE 59.9640% -97 - C2 -4HWR 5.2 SYT_ECOLI
39 PsiBlast_CBE 59.9340% -98 - C2 -4P3P 8.8 SYT_ECOLI
31 PsiBlast_CBE 59.8640% -97 - C2 -1EVL - SYT_ECOLI -
32 PsiBlast_CBE 59.8140% -96 - C2 -1EVL - SYT_ECOLI -
33 PsiBlast_CBE 59.8040% -95 - C2 -1EVL - SYT_ECOLI -
4 PsiBlast_PDB 59.7640% -94 - C2 -1EVK - SYT_ECOLI -
38 PsiBlast_CBE 59.7040% -96 - C2 -4HWO 6.6 SYT_ECOLI
35 PsiBlast_CBE 59.6540% -96 - C2 -4HWS 5.3 SYT_ECOLI
37 PsiBlast_CBE 59.5240% -95 - C2 -4HWP 5.8 SYT_ECOLI
6 PsiBlast_PDB 59.4540% -99 - C2 -1FYF 5.9 SYT_ECOLI
9 PsiBlast_PDB 59.4340% -97 - C2 -4HWP 4.6 SYT_ECOLI
8 PsiBlast_PDB 59.3840% -96 - C2 -4HWO 6.6 SYT_ECOLI
88 HHSearch 45.7435% 22 - C2 -3UH0 6.5 SYTM_YEAST
20 PsiBlast_PDB 43.9834% 18 - C2 -4YYE 6.7 SYTM_YEAST
19 PsiBlast_PDB 43.4134% 14 - C2 -3UH0 6.5 SYTM_YEAST