@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y0S0: (2018-01-22 )
MFSKVLIANRGEIAVRIIRACRELGIQTVAIYSEADAEALHTQLADEAICIGPAKAVDSYLNVQEVLSAAIVTKAEAIHPGFGFLSENSRFASMCEECNITFIGPKSATIDAMGNKINARQLMQEANVPVIPGSTGVLSTVEEALEIADRIGYPVMLKAAAGGGGKGIRKVQSKEELPQHFSSAQQEAAAAFGNDDMYLEKIIYPARHIEVQILGDRFGHVIHLGERDCSLQRNNQKVLEESPSVVISQTKREALGDAAVRAAKAVNYENAGTIEFLMDEEGDFYFMEMNTRIQVEHPVTEMVTGIDLVKKQVEIAAGEPLNVCQEEVVFQGHAIECRINAENPAFHFAPSPGKIQNLLLPAGGMGLRVDSAVYPGYTIPPYYDSMIAKIIVHGNTRFEALMKMQRALSEFITEGIITNAEFQMDLISHPAVIAGDYSTAFLQEEFLPNWTPETEIGGA

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_7(2VPQ)
?
[Raw transfer]




ANP_A_3(2VPQ)
?
[Raw transfer]




ANP_A_7(3OUU)
?
[Raw transfer]




ANP_B_7(2VPQ)
?
[Raw transfer]




ADP_A_4(3RUP)
ACCC_ECOLI
[Raw transfer]




ANP_A_5(2J9G)
ACCC_ECOLI
[Raw transfer]




ATF_A_4(2VR1)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3G8C)
ACCC_ECOLI
[Raw transfer]




ADP_A_4(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_2(3RV4)
ACCC_ECOLI
[Raw transfer]




ADP_A_8(3OUZ)
?
[Raw transfer]




ATP_B_4(1DV2)
ACCC_ECOLI
[Raw transfer]




AP2_A_2(2VQD)
ACCC_PSEAE
[Raw transfer]




ATP_A_3(1DV2)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3G8C)
ACCC_ECOLI
[Raw transfer]




ACP_A_3(4MV8)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV4)
ACCC_HAEIN
[Raw transfer]




ACP_A_2(4MV3)
ACCC_HAEIN
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




JZL_A_3(3JZI)
ACCC_ECOLI
[Raw transfer]




GOL_A_5(3VA7)
?
[Raw transfer]




JZL_B_4(3JZI)
ACCC_ECOLI
[Raw transfer]




LZK_B_4(2V59)
ACCC_ECOLI
[Raw transfer]




LZL_A_3(2V5A)
ACCC_ECOLI
[Raw transfer]




LZK_A_3(2V59)
ACCC_ECOLI
[Raw transfer]




LZJ_B_5(2V58)
ACCC_ECOLI
[Raw transfer]




L23_A_4(2W71)
ACCC_ECOLI
[Raw transfer]




OA2_B_5(2W6N)
ACCC_ECOLI
[Raw transfer]




L23_C_6(2W71)
ACCC_ECOLI
[Raw transfer]




ADP_B_9(3RUP)
ACCC_ECOLI
[Raw transfer]




ADP_B_7(3RV3)
ACCC_ECOLI
[Raw transfer]




ADP_A_3(3RV3)
ACCC_ECOLI
[Raw transfer]




BTN_B_9(3G8C)
ACCC_ECOLI
[Raw transfer]




Y7Y_A_2(4RZQ)
ACCC_HAEIN
[Raw transfer]




131 HHSearch 86.0149% -92 - C1 -3OUZ 6.5 ?
21 PsiBlast_CBE 85.8358% -49 - C1 -2VPQ 6.3 ?
117 HHSearch 85.5059% -50 - C1 -2VPQ 6.3 ?
1 PsiBlast_PDB 85.4158% -50 - C1 -2VPQ 6.9 ?
2 PsiBlast_PDB 84.6754% -97 - C1 -1ULZ - ? -
132 HHSearch 84.5149% -90 - C1 -3OUU 6.8 ?
119 HHSearch 79.9144% -78 - C1 -5MLK - ? -
135 HHSearch 78.5252% -77 - C1 -1ULZ - ? -
50 PsiBlast_CBE 78.3951% -97 - C1 -4RZQ 2.9 ACCC_HAEIN
115 HHSearch 77.9049% -96 - C1 -3U9T - ? -
58 PsiBlast_CBE 77.3251% -33 - C1 -3RV4 8.1 ACCC_ECOLI
56 PsiBlast_CBE 76.7351% -36 - C1 -3G8D - ACCC_ECOLI -
3 PsiBlast_PDB 76.6452% -33 - C1 -2VQD 7.0 ACCC_PSEAE
43 PsiBlast_CBE 76.6251% -34 - C1 -3G8C 6.1 ACCC_ECOLI
35 PsiBlast_CBE 76.5051% -35 - C1 -2W6N 4.2 ACCC_ECOLI
42 PsiBlast_CBE 76.4051% -31 - C1 -3G8C 5.1 ACCC_ECOLI
40 PsiBlast_CBE 76.4051% -36 - C1 -2V58 5.4 ACCC_ECOLI
10 PsiBlast_PDB 76.3051% -36 - C1 -2VR1 4.2 ACCC_ECOLI
118 HHSearch 76.2050% -97 - C1 -3N6R - ? -
36 PsiBlast_CBE 76.1151% -34 - C1 -2W6M - ACCC_ECOLI -
53 PsiBlast_CBE 75.5151% -29 - C1 -4MV4 4.1 ACCC_HAEIN
46 PsiBlast_CBE 74.3451% -36 - C1 -3RUP 6.7 ACCC_ECOLI
45 PsiBlast_CBE 74.2551% -34 - C1 -3RV3 7.8 ACCC_ECOLI
48 PsiBlast_CBE 74.1051% -29 - C1 -1DV2 4.0 ACCC_ECOLI
47 PsiBlast_CBE 74.0451% -35 - C1 -3RUP 7.8 ACCC_ECOLI
54 PsiBlast_CBE 73.9051% -30 - C1 -4MV3 4.3 ACCC_HAEIN
44 PsiBlast_CBE 73.8551% -33 - C1 -3RV3 6.1 ACCC_ECOLI
49 PsiBlast_CBE 73.8451% -33 - C1 -1DV2 5.0 ACCC_ECOLI
134 HHSearch 73.8252% -31 - C1 -3G8C 2.8 ACCC_ECOLI
9 PsiBlast_PDB 73.6251% -32 - C1 -2J9G 4.9 ACCC_ECOLI
6 PsiBlast_PDB 73.3751% -33 - C1 -3JZI 7.8 ACCC_ECOLI
52 PsiBlast_CBE 72.9951% -33 - C1 -4MV8 4.7 ACCC_HAEIN
140 Fugue 56.4139% 23 - C1 -3VA7 2.2 ?
105 PsiBlast_CBE 55.7542% -41 - C1 -3VA7 2.2 ?