@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y129: (2018-01-23 )
MANALEINNLKKIYGSGVEALRGIDLSVKEGDFYALLGPNGAGKSTTIGIITSLVNKTSGKVNVFGYDLDKDLVRAKQQIGLVPQEFNFNPFETVQQIVVNQAGYYGVSRKEAMKRSEKYLKQSNLWEKRNVRARMLSGGMKRRLMIARALMHEPRLLILDEPTAGVDIELRREMWEFLRELNENGTTIILTTHYLEEAEMLCRNIGIIQSGELIENTSMKELLSKLQFETFIFDLAPYDTKPVIEGYACTFEDEQTIAVEVERNQGVNGIFDQLTRQGIKVLSMRNKSNRLEELFLKITEENNHTEEKNV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_J_5(4YMU)
?
[Raw transfer]



ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]



ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]



ANP_J_5(3C41)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]



ANP_A_8(2ONJ)
Y1866_STAAM
[Raw transfer]



ADP_A_2(4U00)
?
[Raw transfer]



AT4_A_5(2OLK)
?
[Raw transfer]



ADP_A_3(4YER)
?
[Raw transfer]



IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]
2 PsiBlast_PDB 87.9333% -85 - C1 -4YER 6.1 ?
1 PsiBlast_PDB 77.8337% -49 - C1 -1VPL - ? -
87 HHSearch 74.7328%-111 - C1 -3RLF - MALK_ECOLI -
86 HHSearch 74.3328%-106 - C1 -2AWN - MALK_ECOLI -
95 HHSearch 74.2033% -27 - C1 -5X40 - CBIO_RHOCB -
100 HHSearch 73.5130% -92 - C1 -1Z47 - ? -
89 HHSearch 71.9733% -22 - C1 -5X3X - CBIO_RHOCB -
14 PsiBlast_PDB 71.6133% -22 - C1 -5X40 7.4 CBIO_RHOCB
27 PsiBlast_CBE 70.3833% -22 - C1 -5X40 7.5 CBIO_RHOCB
74 Fugue 70.3323% -62 - C1 -1Z47 - ? -
16 PsiBlast_PDB 69.6630% -32 - C1 -4U00 6.2 ?
9 PsiBlast_PDB 69.6029% -27 - C1 -2OLJ - ? -
7 PsiBlast_PDB 69.0933% -13 - C1 -5X3X - CBIO_RHOCB -
5 PsiBlast_PDB 68.7532% 7 - C1 -3TUZ - METN_ECOLI -
17 PsiBlast_PDB 68.1930% -31 - C1 -4U02 - ? -
10 PsiBlast_PDB 67.8029% -29 - C1 -2OLK 6.1 ?
97 HHSearch 67.4433% 10 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 67.1432% 12 - C1 -3TUI - METN_ECOLI -
11 PsiBlast_PDB 67.0129% -28 - C1 -2OUK - ? -
13 PsiBlast_PDB 66.9129% -31 - C1 -3C4J - ? -
83 HHSearch 54.1833% 7 - C1 -4YER 2.0 ?
36 PsiBlast_CBE 47.9835% 34 - C1 -3TIF 3.1 Y796_METJA