@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y145: (2018-01-23 )
MNDLSEKVIVIMGASSGIGEATTKLLAEKGAKLVIAARREDRLKAIKESLPEAELYIQTADVRDFAQVQAVIDLAMEKFGRIDVLYNNAGIMPTAPLVEGHRDEWQNMLDINIMGVLNGISAVLPIMEKQKSGHIISTDSVAGHVVYPDSAVYCGTKFAVRAIMEGLRQEQRQNNIKSTIISPGAVQTELYQTISDKKAALELHEAQKEWGLTSEDIASAVAFAIETPDRMSVSNMIIRPTTQEV

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_D_11(2JAP)
?
[Raw transfer]



NDP_C_9(2JAP)
?
[Raw transfer]



NDP_A_5(2JAP)
?
[Raw transfer]



NDP_A_5(2JAH)
?
[Raw transfer]



NAP_A_5(3P19)
?
[Raw transfer]



NDP_B_7(2JAP)
?
[Raw transfer]



NAP_B_6(3P19)
?
[Raw transfer]



NAP_C_7(3P19)
?
[Raw transfer]



NAP_C_7(3P19)
?
[Raw transfer]



NAD_A_4(5IG2)
?
[Raw transfer]



3HR_A_3(3W8E)
?
[Raw transfer]



3HR_A_3(5B4T)
?
[Raw transfer]



3HL_D_14(2ZTL)
?
[Raw transfer]



3HL_B_9(2ZTL)
?
[Raw transfer]



MLA_A_3(5B4U)
?
[Raw transfer]



GOL_B_8(3LF2)
?
[Raw transfer]



MLA_A_3(3W8F)
?
[Raw transfer]



DXX_A_3(3W8D)
?
[Raw transfer]



DXX_A_3(5B4V)
?
[Raw transfer]



GOL_D_12(3LF2)
?
[Raw transfer]
24 PsiBlast_CBE 86.9937% -95 - C1 -3P19 13.2 ?
1 PsiBlast_PDB 84.8837% -86 - C1 -3P19 14.1 ?
25 PsiBlast_CBE 84.7837% -93 - C1 -3P19 13.6 ?
154 HHSearch 84.7046% -54 - C1 -3TFO - ? -
22 PsiBlast_CBE 84.4747% -54 - C1 -3TFO - ? -
143 HHSearch 84.4337%-112 - C1 -3P19 13.2 ?
28 PsiBlast_CBE 84.2638% -39 - C1 -2JAP 13.9 ?
27 PsiBlast_CBE 84.0438% -38 - C1 -2JAP 13.9 ?
23 PsiBlast_CBE 83.5737% -85 - C1 -3P19 - ? -
2 PsiBlast_PDB 83.2238% -39 - C1 -2JAP 14.1 ?
26 PsiBlast_CBE 82.9138% -37 - C1 -2JAP 14.1 ?
3 PsiBlast_PDB 82.9137% -38 - C1 -2JAH 14.2 ?
146 HHSearch 82.0737% -88 - C1 -3P19 - ? -
21 PsiBlast_CBE 81.3147% -49 - C1 -3TFO - ? -
144 HHSearch 75.3132%-112 - C1 -2EHD - ? -
10 PsiBlast_PDB 74.9229% -34 - C1 -1XG5 - DHR11_HUMAN -
40 PsiBlast_CBE 74.7733% -41 - C1 -1IY8 - LVR_LEIAQ -
13 PsiBlast_PDB 74.5633% -37 - C1 -1IY8 - LVR_LEIAQ -
47 PsiBlast_CBE 74.4032% -98 - C1 -4NBU - ? -
37 PsiBlast_CBE 74.2033% -38 - C1 -1IY8 - LVR_LEIAQ -
117 PsiBlast_CBE 54.5233% -71 - C1 -3LF2 2.6 ?
115 PsiBlast_CBE 51.8533% -76 - C1 -3LF2 2.8 ?