@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y183: (2018-01-24 )
MKMIVGLGNPGTKYQYTKHNIGFMVVDKIAREHQATFKKNPFEAEVAEFFHNGEKILLVKPQTFMNESGRAVGPLMTYFGIYPEELVVIYDDLDLAVGKIRLRQKGSAGGHNGIKSIISHLNTNVFDRIKVGIGRPEGKKTVVQHVLSPFSKENQPLIEESMCQSVKAVEYLIEGHSFVDAMNRFN

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_9(4IKO)
?
[Raw transfer]




GOL_A_9(4JY7)
?
[Raw transfer]




0L1_A_3(4DHW)
PTH_PSEAE
[Raw transfer]




PML_B_4(4DJJ)
PTH_PSEAE
[Raw transfer]




PEG_B_4(4ERX)
PTH_PSEAE
[Raw transfer]




3NZ_A_3(4QBK)
PTH_PSEAE
[Raw transfer]




5AE_A_2(4QD3)
PTH_PSEAE
[Raw transfer]




0L1_B_4(4DHW)
PTH_PSEAE
[Raw transfer]




0L1_B_4(4DHW)
PTH_PSEAE
[Raw transfer]




PML_A_3(4DJJ)
PTH_PSEAE
[Raw transfer]




PEG_A_3(4ERX)
PTH_PSEAE
[Raw transfer]




URI_A_2(4JX9)
?
[Raw transfer]




EDO_A_4(3NEA)
PTH_FRATT
[Raw transfer]




EDO_A_4(3NEA)
PTH_FRATT
[Raw transfer]




CTN_A_2(4JWK)
?
[Raw transfer]




TLA_A_3(4OLJ)
?
[Raw transfer]




50 HHSearch 97.0547%-125 - C8 -4YLY - PTH_STAAU -
2 PsiBlast_PDB 97.0547%-125 - C8 -4YLY - PTH_STAAU -
21 PsiBlast_CBE 96.4047%-123 - C8 -4YLY - PTH_STAAU -
1 PsiBlast_PDB 80.7752% -2 - C8 -4QT4 - PTH_STRPZ -
59 HHSearch 80.6439% -76 - C- -1RYB - CRS2_MAIZE -
54 HHSearch 80.5541% -83 - C8 -1RYN - CRS2_MAIZE -
11 PsiBlast_PDB 79.3540% -83 - C8 -1RYN - CRS2_MAIZE -
71 Fugue 79.2252% 11 - C8 -4QT4 - PTH_STRPZ -
56 HHSearch 79.0334% -27 - C8 -4DHW 3.1 PTH_PSEAE
15 PsiBlast_PDB 78.4339% -77 - C- -1RYB - CRS2_MAIZE -
48 PsiBlast_CBE 78.3833% -26 - C8 -4DHW 3.1 PTH_PSEAE
43 PsiBlast_CBE 77.4533% -23 - C8 -4FNO - PTH_PSEAE -
39 PsiBlast_CBE 76.9333% -21 - C8 -4QD3 3.6 PTH_PSEAE
46 PsiBlast_CBE 76.7533% -19 - C8 -4DJJ 3.5 PTH_PSEAE
49 PsiBlast_CBE 76.7033% -25 - C8 -4DHW 2.8 PTH_PSEAE
42 PsiBlast_CBE 76.5533% -26 - C8 -4FNO - PTH_PSEAE -
64 HHSearch 76.4639% -10 - C8 -3V2I - PTH_BURTA -
45 PsiBlast_CBE 76.3233% -20 - C8 -4ERX 3.0 PTH_PSEAE
40 PsiBlast_CBE 76.3233% -22 - C8 -4QBK 6.4 PTH_PSEAE
41 PsiBlast_CBE 76.0733% -26 - C8 -4JC4 - PTH_PSEAE -
44 PsiBlast_CBE 75.5633% -21 - C8 -4ERX 2.0 PTH_PSEAE
47 PsiBlast_CBE 74.9133% -21 - C8 -4DJJ 2.9 PTH_PSEAE
26 PsiBlast_CBE 73.5636% -21 - C8 -4JWK 3.5 ?
32 PsiBlast_CBE 72.7936% -16 - C8 -4OLJ 2.7 ?
63 HHSearch 72.6636% -12 - C8 -3NEA 3.0 PTH_FRATT
25 PsiBlast_CBE 72.5436% -17 - C8 -4JX9 4.1 ?
31 PsiBlast_CBE 70.1039% -16 - C8 -3NEA 3.0 PTH_FRATT