@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1B9: (2018-01-25 )
MADDRKAALDAALKKIEKSYGKGSIMKLGEKIDQQISTIPSGSLALDVALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQKNGGTAAFIDAEHALDPQYAQKLGVNIDELLLSQPDTGEQGLEIADALVSSGAVDIVVVDSVAALVPRAEIDGEMGDSHVGLQARLMSQALRKLSGSINKTKTIAIFINQIREKVGVMFGNPEITPGGRALKFYATIRLEVRRAEQLKQGTDIVGNRTKIKVVKNKVAPPFKIAEVDVMYGLGISQEGELLDMAVEKDIVDKSGAWYSYKEDRIGQGRENAKIYMANHPEMMAEVSALVRAAYGIGEEVAVPEDEKGQEELPLVEE

Atome Classification :

(39 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_B_2(1MO3)
RECA_MYCTU
[Raw transfer]




AGS_A_2(2ZRE)
RECA_MYCS2
[Raw transfer]




SAP_B_2(2ODW)
RECA_MYCS2
[Raw transfer]




DTP_B_2(1UBG)
RECA_MYCS2
[Raw transfer]




AGS_A_2(2ZRJ)
RECA_MYCS2
[Raw transfer]




DTP_B_2(1MO6)
RECA_MYCTU
[Raw transfer]




ADP_A_2(2ZRO)
RECA_MYCS2
[Raw transfer]




ADP_A_2(2ZRD)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRF)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRK)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRM)
RECA_MYCS2
[Raw transfer]




DTP_B_2(2ODN)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1MO4)
RECA_MYCTU
[Raw transfer]




DTP_A_2(2ZRG)
RECA_MYCS2
[Raw transfer]




ADP_B_2(2OEP)
RECA_MYCS2
[Raw transfer]




ADP_A_6(1XMV)
RECA_ECOLI
[Raw transfer]




AGS_A_2(2ZRA)
RECA_MYCS2
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




ADP_A_2(5JRJ)
?
[Raw transfer]




DTP_A_3(2G88)
RECA_MYCS2
[Raw transfer]




SAP_B_2(1UBF)
RECA_MYCS2
[Raw transfer]




ADP_A_2(5JRJ)
?
[Raw transfer]




ANP_A_3(1XMS)
RECA_ECOLI
[Raw transfer]




SAP_B_2(1MO5)
RECA_MYCTU
[Raw transfer]




DTP_A_2(2ZRP)
RECA_MYCS2
[Raw transfer]




ADP_A_3(1G18)
RECA_MYCTU
[Raw transfer]




ADP_B_2(1UBE)
RECA_MYCS2
[Raw transfer]




DTP_A_2(2ZRL)
RECA_MYCS2
[Raw transfer]




GOL_A_2(4PQY)
RECA_MYCTU
[Raw transfer]




GOL_A_5(4PR0)
RECA_MYCTU
[Raw transfer]




ADP_B_2(1REA)
RECA_ECOLI
[Raw transfer]




28 PsiBlast_CBE 89.1963% -84 - C1 -4PQY 2.3 RECA_MYCTU
18 PsiBlast_PDB 88.7664% -79 - C1 -2ZRC - RECA_MYCS2 -
17 PsiBlast_PDB 88.7064% -87 - C1 -2ZRA 5.9 RECA_MYCS2
27 PsiBlast_CBE 88.6963% -83 - C1 -4PR0 2.3 RECA_MYCTU
40 PsiBlast_CBE 88.3460% -93 - C1 -3CMT - RECA_ECOLI -
22 PsiBlast_CBE 88.0864% -88 - C1 -2ZRF 7.3 RECA_MYCS2
14 PsiBlast_PDB 87.8864% -81 - C1 -2ZRO 7.5 RECA_MYCS2
41 PsiBlast_CBE 87.7260% -94 - C1 -3CMT - RECA_ECOLI -
61 HHSearch 87.5960% -94 - C1 -3CMT - RECA_ECOLI -
29 PsiBlast_CBE 87.5963% -90 - C1 -1MO6 6.8 RECA_MYCTU
35 PsiBlast_CBE 87.5160% -90 - C1 -3CMU - RECA_ECOLI -
20 PsiBlast_PDB 87.2964% -83 - C1 -2ZRE 5.6 RECA_MYCS2
16 PsiBlast_PDB 87.0264% -83 - C1 -2ZR0 - RECA_MYCS2 -
13 PsiBlast_PDB 87.0264% -79 - C1 -2ZRM 6.6 RECA_MYCS2
56 HHSearch 86.8960% -91 - C1 -3CMT - RECA_ECOLI -
24 PsiBlast_CBE 86.8664% -80 - C1 -2ZRK 7.9 RECA_MYCS2
38 PsiBlast_CBE 86.6060% -95 - C1 -3CMW - RECA_ECOLI -
19 PsiBlast_PDB 86.4364% -81 - C1 -2ZRD 6.6 RECA_MYCS2
25 PsiBlast_CBE 86.3764% -85 - C1 -2ZRJ 6.8 RECA_MYCS2
42 PsiBlast_CBE 86.3060% -95 - C1 -1XMV 8.2 RECA_ECOLI
32 PsiBlast_CBE 86.2063% -80 - C1 -1MO3 6.1 RECA_MYCTU
15 PsiBlast_PDB 85.4164% -84 - C1 -2ZRP 6.0 RECA_MYCS2
6 PsiBlast_PDB 85.2664% -79 - C1 -2ODN 8.2 RECA_MYCS2
31 PsiBlast_CBE 84.4463% -81 - C1 -1MO4 5.2 RECA_MYCTU
21 PsiBlast_CBE 84.3164% -88 - C1 -2ZRG 6.6 RECA_MYCS2
30 PsiBlast_CBE 84.0863% -83 - C1 -1MO5 5.4 RECA_MYCTU
47 HHSearch 84.0764% -83 - C1 -2G88 8.7 RECA_MYCS2
5 PsiBlast_PDB 83.9964% -83 - C1 -2G88 8.7 RECA_MYCS2
33 PsiBlast_CBE 83.8863% -82 - C1 -1G18 5.3 RECA_MYCTU
23 PsiBlast_CBE 83.8464% -78 - C1 -2ZRL 5.2 RECA_MYCS2
3 PsiBlast_PDB 82.3264% -78 - C1 -1UBF 6.8 RECA_MYCS2
9 PsiBlast_PDB 82.0564% -78 - C1 -2OEP 6.2 RECA_MYCS2
43 PsiBlast_CBE 81.9060% -95 - C1 -1XMS 6.6 RECA_ECOLI
2 PsiBlast_PDB 81.9064% -79 - C1 -1UBE 5.7 RECA_MYCS2
7 PsiBlast_PDB 80.8864% -81 - C1 -2ODW 5.6 RECA_MYCS2
4 PsiBlast_PDB 79.9064% -71 - C1 -1UBG 6.9 RECA_MYCS2
45 PsiBlast_CBE 75.7760% - - C1 -1REA 2.7 RECA_ECOLI
49 HHSearch 70.6863% 31 - C1 -5JRJ 8.0 ?
34 PsiBlast_CBE 68.6462% 33 - C1 -5JRJ 8.0 ?