@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1I9: (2018-01-26 )
MEIYDITIIGAGPVGMFAAFYAGMRQAKTKIIDSLPQLGGQLATLYPEKYIYDIPGYPAIKASELIDQLEKQLTTFNHTFHLKEEVLSLTREDEVIEITTNKGIHYSKAVILALGNGSFQPRKLNLDNAESFENHGLDYFVNDLMKYAGKKVAIAGGGDSAIDWTLMLEPIASEVYLIHRRPEFRAHEHSVSRLKSSSVNLLTPYLIDGLSGNNGELTDIRLKKVKSDETIDLMIDSLIVNYGFSSNLEHLSSWGLDSTRNAITVKSDMSTSIPGVYAAGDICTYEGKVKLIATGLGEAPTAVNNALHYINPKERTQPGHSTSLYDKNLRPS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_3(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_A_2(3LZW)
FENR2_BACSU
[Raw transfer]




FAD_A_2(3LZW)
FENR2_BACSU
[Raw transfer]




FAD_B_6(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_B_6(3LZX)
FENR2_BACSU
[Raw transfer]




FAD_A_3(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_A_3(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_B_4(3AB1)
FENR_CHLTE
[Raw transfer]




FAD_B_4(3AB1)
FENR_CHLTE
[Raw transfer]




2 PsiBlast_PDB 89.9559% -32 - C1 -3LZX 12.0 FENR2_BACSU
21 PsiBlast_CBE 89.8859% -34 - C1 -3LZX 12.1 FENR2_BACSU
45 HHSearch 89.7660% -34 - C1 -3LZX 12.1 FENR2_BACSU
44 HHSearch 89.5560% -33 - C1 -3LZW 12.3 FENR2_BACSU
1 PsiBlast_PDB 89.3359% -33 - C1 -3LZW 12.3 FENR2_BACSU
4 PsiBlast_PDB 80.7142% -27 - C1 -3AB1 11.9 FENR_CHLTE
22 PsiBlast_CBE 79.5942% -22 - C1 -3AB1 12.5 FENR_CHLTE
47 HHSearch 79.4041% -38 - C1 -3AB1 11.9 FENR_CHLTE
48 HHSearch 76.7241% -28 - C1 -3AB1 12.5 FENR_CHLTE
3 PsiBlast_PDB 76.7242% -31 - C1 -2ZBW - FENR_THET8 -
46 HHSearch 72.6842% -28 - C1 -2ZBW - FENR_THET8 -
6 PsiBlast_PDB 67.8128% -46 - C1 -3F8P - ? -
7 PsiBlast_PDB 67.7728% -42 - C1 -3F8R - ? -
55 HHSearch 67.7026% -42 - C1 -5MIT - ? -
5 PsiBlast_PDB 66.9728% -43 - C1 -3F8D - ? -
49 HHSearch 65.2428% -11 - C1 -3F8D - ? -
52 HHSearch 65.0628% -10 - C1 -3F8P - ? -
51 HHSearch 64.3826% -29 - C1 -5UWY - ? -
9 PsiBlast_PDB 63.2328% -13 - C1 -5UTH - ? -
11 PsiBlast_PDB 61.6126% 19 - C1 -5MIP - ? -