@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1L6: (2018-01-26 )
MKVKKAVIPAAGLGTRFLPATKAMAKEMLPIVDKPTIQFIVEEALDSGIEDILIVTGKEKRPIEDHFDANIELENNLREKEKTELLALVEETTQVNLHFIRQSHPRGLGDAVLQAKAFIGNEPFVVMLGDDLMKDDIPLTQQLMMDYEETQASAVAVMRVPENETSKYGIIDPKTDSEKGRCRVKGFVEKPEMGKAPSNLAIIGRYLLTPKIFEILETQEPGAGNEIQLTDALQTLNQTEAVYAREFKGKRYDVGDKLGYMKTNIEYGLQHSEIGTSLSAYIIQLSKKLRTES

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GUD_B_14(2PA4)
?
[Raw transfer]



UPG_A_5(3JUK)
?
[Raw transfer]



GUD_D_16(2PA4)
?
[Raw transfer]



UPG_A_5(3JUK)
?
[Raw transfer]



UPG_D_17(3JUK)
?
[Raw transfer]



UPG_C_13(3JUK)
?
[Raw transfer]



UPG_B_9(3JUK)
?
[Raw transfer]



GUD_B_14(2PA4)
?
[Raw transfer]



GUD_D_16(2PA4)
?
[Raw transfer]



GUD_C_15(2PA4)
?
[Raw transfer]



GUD_A_13(2PA4)
?
[Raw transfer]



UTP_A_2(5VE7)
?
[Raw transfer]



THM_A_5(5IDT)
?
[Raw transfer]



CIT_A_2(5VCT)
?
[Raw transfer]
3 PsiBlast_PDB 83.3047% 4 - C1 -5J49 - ? -
25 PsiBlast_CBE 82.4043%-100 - C1 -2UX8 - ? -
2 PsiBlast_PDB 82.2947% 9 - C1 -5VE7 6.6 ?
23 PsiBlast_CBE 81.6943% -96 - C1 -2UX8 - ? -
27 PsiBlast_CBE 80.8543% -97 - C1 -2UX8 - ? -
1 PsiBlast_PDB 80.8447% 10 - C1 -5VCT 3.7 ?
5 PsiBlast_PDB 80.1847% -13 - C1 -3JUJ - ? -
26 PsiBlast_CBE 79.7243%-101 - C1 -2UX8 - ? -
28 PsiBlast_CBE 79.1943% -98 - C1 -2UX8 - ? -
24 PsiBlast_CBE 78.3743% -99 - C1 -2UX8 - ? -
21 PsiBlast_CBE 78.3447% 8 - C1 -5J49 - ? -
30 PsiBlast_CBE 78.1447% -20 - C1 -3JUK 8.2 ?
4 PsiBlast_PDB 76.8845% 12 - C1 -5I1F - ? -
6 PsiBlast_PDB 76.4147% -18 - C1 -3JUK 7.6 ?
46 HHSearch 76.0847% 13 - C1 -3JUJ - ? -
29 PsiBlast_CBE 75.9247% -14 - C1 -3JUK 8.0 ?
35 HHSearch 75.8845% -21 - C1 -2UX8 - ? -
37 HHSearch 75.8648% 8 - C1 -5J49 - ? -
31 PsiBlast_CBE 74.6847% -16 - C1 -3JUK 7.7 ?
45 HHSearch 74.4547% 2 - C1 -3JUK 7.6 ?
33 PsiBlast_CBE 74.3938% -9 - C1 -2PA4 5.0 ?
7 PsiBlast_PDB 72.3538% -10 - C1 -2PA4 6.8 ?
39 HHSearch 71.8639% -14 * C1 *2PA4 5.9 ?
32 PsiBlast_CBE 71.7038% -14 - C1 -2PA4 5.6 ?
34 PsiBlast_CBE 70.9538% -11 - C1 -2PA4 4.3 ?
40 HHSearch 68.8239% -9 - C1 -2PA4 6.8 ?