@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1Q6: (2018-01-27 )
MEKTYQAGTNEGIVDFINMEDLEIAASQVIPAGGYGYISSGAGDLFTYQENERAFNHRLIIPHVLRDVELPDTTTHFDEEMLTAPIIMAPVAAHGLAHVKAEKASAKGVADFGTIYTASSYASCTLEEIREAGGEKAPQWFQFYMSKDNGINLDILEVAKRNGAKAIVLTADATVGGNRETDRRNGFTFPLPMPIVQAYQSGVGQTMDAVYKSSKQKLSPKDVEFIAAHSDLPVYVKGVQSEEDVYRSLESGAGGIWVSNHGGRQLDGGPAAFDSLQYVAEAVDKRVPIVFDSGVRRGQHVFKAIASGADLVAIGRPVIYGLSLGGSTGVHQVFDFFKTELEMVMQLAGTQTVEDIKKIKLRENRFI

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FNS_E_5(1SZG)
CYB2_YEAST
[Raw transfer]




FNS_G_7(1SZG)
CYB2_YEAST
[Raw transfer]




FMN_A_3(2NLI)
?
[Raw transfer]




FMN_A_3(2ZFA)
?
[Raw transfer]




FMN_B_6(2NLI)
?
[Raw transfer]




FMN_A_3(2NLI)
?
[Raw transfer]




FMN_B_5(2ZFA)
?
[Raw transfer]




PYR_B_6(1FCB)
CYB2_YEAST
[Raw transfer]




GLV_A_3(2RDU)
HAOX1_HUMAN
[Raw transfer]




173_K_11(1SZE)
CYB2_YEAST
[Raw transfer]




GLV_A_3(2RDU)
HAOX1_HUMAN
[Raw transfer]




PYR_B_7(1KBI)
CYB2_YEAST
[Raw transfer]




PYR_B_7(1LDC)
CYB2_YEAST
[Raw transfer]




173_I_9(1SZE)
CYB2_YEAST
[Raw transfer]




DHP_I_9(1AL8)
GOX_SPIOL
[Raw transfer]




PPY_A_5(1LCO)
CYB2_YEAST
[Raw transfer]




PYR_B_7(1KBI)
CYB2_YEAST
[Raw transfer]




PYR_K_11(1SZF)
CYB2_YEAST
[Raw transfer]




PYR_I_9(1SZF)
CYB2_YEAST
[Raw transfer]




PYR_B_6(2OZ0)
CYB2_YEAST
[Raw transfer]




2RD_A_3(2RDT)
HAOX1_HUMAN
[Raw transfer]




PPY_B_7(1LCO)
CYB2_YEAST
[Raw transfer]




EDO_A_4(1KBJ)
CYB2_YEAST
[Raw transfer]




PYR_A_5(1LDC)
CYB2_YEAST
[Raw transfer]




EDO_B_6(1KBJ)
CYB2_YEAST
[Raw transfer]




EDO_B_6(2ZFA)
?
[Raw transfer]




EDO_A_4(2ZFA)
?
[Raw transfer]




25 PsiBlast_CBE 83.0952% -77 - C4 -2J6X - ? -
29 PsiBlast_CBE 82.7452% -76 - C4 -5EBU - ? -
5 PsiBlast_PDB 82.3252% -76 - C4 -2E77 - ? -
33 PsiBlast_CBE 81.6852% -72 - C4 -5EBU - ? -
129 HHSearch 81.1953% -75 - C4 -2NLI 10.8 ?
31 PsiBlast_CBE 79.9552% -13 - C4 -5EBU - ? -
1 PsiBlast_PDB 79.5153% -13 - C4 -4YL2 - ? -
38 PsiBlast_CBE 79.5052% -71 - C4 -2E77 - ? -
22 PsiBlast_CBE 79.3853% -11 - C4 -4YL2 - ? -
30 PsiBlast_CBE 79.3052% -14 - C4 -5EBU - ? -
21 PsiBlast_CBE 79.1853% -13 - C4 -4YL2 - ? -
35 PsiBlast_CBE 79.1352% -10 - C4 -5EBU - ? -
34 PsiBlast_CBE 79.0552% -9 - C4 -5EBU - ? -
42 PsiBlast_CBE 79.0152% -11 - C4 -2DU2 - ? -
27 PsiBlast_CBE 79.0052% -11 - C4 -2J6X - ? -
120 HHSearch 78.9853% -10 - C4 -2DU2 - ? -
41 PsiBlast_CBE 78.9552% -9 - C4 -2DU2 - ? -
32 PsiBlast_CBE 78.9352% -12 - C4 -5EBU - ? -
40 PsiBlast_CBE 78.9152% -8 - C4 -2DU2 - ? -
23 PsiBlast_CBE 78.8753% -12 - C4 -4YL2 - ? -
45 PsiBlast_CBE 78.1252% -85 - C4 -2NLI 11.0 ?
36 PsiBlast_CBE 78.0152% -83 - C4 -2ZFA 10.5 ?
6 PsiBlast_PDB 75.3652% -10 - C4 -2ZFA 10.8 ?
8 PsiBlast_PDB 74.9252% -9 - C4 -2NLI 10.8 ?
119 HHSearch 69.5435% -34 - C4 -2RDU 2.8 HAOX1_HUMAN
13 PsiBlast_PDB 69.3434% -36 - C4 -2RDU 2.8 HAOX1_HUMAN
62 PsiBlast_CBE 61.7133% -7 - C4 -1FCB 3.8 CYB2_YEAST
60 PsiBlast_CBE 61.5233% -5 - C4 -1KBI 2.2 CYB2_YEAST
58 PsiBlast_CBE 61.4933% -9 - C4 -1KBJ 2.1 CYB2_YEAST
18 PsiBlast_PDB 61.2133% -10 - C4 -1KBJ 2.2 CYB2_YEAST
64 PsiBlast_CBE 60.1133% -5 - C4 -1SZE 2.9 CYB2_YEAST
66 PsiBlast_CBE 59.4933% -5 - C4 -1LDC 4.2 CYB2_YEAST
63 PsiBlast_CBE 59.4833% -4 - C4 -1SZE 3.4 CYB2_YEAST
65 PsiBlast_CBE 59.3333% -4 - C4 -1LDC 3.1 CYB2_YEAST
68 PsiBlast_CBE 59.1533% -5 - C4 -1LCO 3.1 CYB2_YEAST
71 PsiBlast_CBE 59.0833% -0 - C4 -1SZF 2.7 CYB2_YEAST
73 PsiBlast_CBE 58.4733% -5 - C4 -2OZ0 3.8 CYB2_YEAST
67 PsiBlast_CBE 58.2533% -2 - C4 -1LCO 3.0 CYB2_YEAST
128 HHSearch 57.9734% 19 - C4 -1KBI 2.2 CYB2_YEAST
72 PsiBlast_CBE 57.7833% 2 - C4 -1SZF 3.1 CYB2_YEAST