@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y1X4: (2018-01-28 )
MKKLVAGLLTAVALLAMSACGADQKNTAQTSSSTKESAEVSSGASEQVYTDPKEMKESYDVVIIGAGGAGMAAAIEAKDAGLNPVILEKMPVAGGNTSKSSSGMNASETKFQKEEGIKDSNDAFYEETLKGGGGTNDKEMLRYFVDHSADAVDWLDQNGIKLDNLTITGGMSEKRTHRPSDGSAIGGYLVEGLLNNVHEREIPIFVNADVTDIKKNGETVNEVTVHVQGEEPKEVTGKAIVVTTGGFGASKEFIEKYRPDLADYITTNQEGSTGDGITMIEKLGGQTVDMDKIQIHPTVQQDEGVLIGEVVRGEGAILVDQEGKRFVNEMDTRDKVSAAITALPEKSAYLIFDQGVRDRATAIEFYDQKGYVTTGKTMEELAEKIDLPKETLAKTVDGWNTDVAEKKDAQFNRATAMEHDLSSPNYYAIKIAPGIHYTMGGVKINTNTEVLDKENQPIRGLYAAGEVTGGLHGNNRIGGNSVAEIIIFGRQAGIQAARFASENE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_D_12(1QO8)
FRD2_SHEFN
[Raw transfer]



FAD_A_7(1QO8)
FRD2_SHEFN
[Raw transfer]



FUM_B_16(1M64)
FRDA_SHEFR
[Raw transfer]



SIN_A_2(5GLG)
?
[Raw transfer]



FUM_A_15(1JRX)
FRDA_SHEFR
[Raw transfer]
96 HHSearch 93.1845% 0 - C- -1D4C - FRDA_SHEON -
23 PsiBlast_CBE 92.0845% 0 - C- -1D4C - FRDA_SHEON -
22 PsiBlast_CBE 92.0845% 0 - C- -1D4C - FRDA_SHEON -
21 PsiBlast_CBE 92.0845% 0 - C- -1D4C - FRDA_SHEON -
1 PsiBlast_PDB 92.0845% 0 - C- -1D4C - FRDA_SHEON -
2 PsiBlast_PDB 68.4641% -3 - C2 -1QO8 11.8 FRD2_SHEFN
24 PsiBlast_CBE 67.5541% -7 - C2 -1QO8 11.9 FRD2_SHEFN
95 HHSearch 66.6043% 14 * C2 *1Y0P - FRDA_SHEFR -
97 HHSearch 66.5143% 14 - C2 -1KSU - FRDA_SHEFR -
114 Fugue 66.4439% 45 - C2 -1JRX - FRDA_SHEFR -
115 Fugue 66.3839% 45 - C2 -1QJD - FRDA_SHEFR -
94 HHSearch 65.5641% 7 - C2 -1QO8 - FRD2_SHEFN -
29 PsiBlast_CBE 63.7342% 12 - C2 -1M64 2.8 FRDA_SHEFR
17 PsiBlast_PDB 63.7241% 14 - C2 -1LJ1 - FRDA_SHEFR -
10 PsiBlast_PDB 63.4742% 17 - C2 -1KSS - FRDA_SHEFR -
5 PsiBlast_PDB 63.4542% 16 - C2 -1P2E - FRDA_SHEFR -
11 PsiBlast_PDB 63.4042% 15 - C2 -1JRY - FRDA_SHEFR -
15 PsiBlast_PDB 63.3642% 14 - C2 -1M64 - FRDA_SHEFR -
9 PsiBlast_PDB 63.3542% 16 - C2 -2B7R - FRDA_SHEFR -
8 PsiBlast_PDB 63.3542% 17 - C2 -1Y0P - FRDA_SHEFR -