@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y285: (2018-01-29 )
MEKIKVVIVGASHGGHQSILELLTRYGENVDITLFEAGDYISFMSCGMELYLEDKVTDVNDVRNFRPENFPQSNVHILNNHEVKTIDADKKTVTVTSASDNETKEYPYDKLILSSGVKPNNLPVPGADLENVYLMRGYNWATKIKEKLNDPAIKKIAVVGAGYIGIEAAEASRKAGKEVVLLDVIDRPLGTYLDAEMTDILEQHLNENGIEVLTNAKIEAFTGNGKVEAIKTSEKEIPADLVIQAAGVKANTEWLKGIVDLDERGWIQTNEYLQTNLPDVYAVGDATLAYSIPARKKMPIALATVARREARYVVKHLFEEVPNKPFGGVVGSSALSVFDYHFAASGLNSFTAAKAGVDVRVSYYEDTLRPKYVPEEQGNPKVSIQLFSDPMTHQLLGGAVLSTYDVTGQGNVLALAIQNKLTLEELAEADFFFQPGFDRQWSMLNLAAQQALGEEPFVE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_D_4(1NHS)
NAPE_ENTFA
[Raw transfer]



FAD_D_4(1NHR)
NAPE_ENTFA
[Raw transfer]



FAD_C_3(2NPX)
NAPE_ENTFA
[Raw transfer]



FAD_C_3(1NPX)
NAPE_ENTFA
[Raw transfer]



FAD_D_4(1NHP)
NAPE_ENTFA
[Raw transfer]



FAD_D_4(1NHP)
NAPE_ENTFA
[Raw transfer]



FAD_C_3(1NHQ)
NAPE_ENTFA
[Raw transfer]



FAD_B_2(1JOA)
NAPE_ENTFA
[Raw transfer]



FAD_B_2(1JOA)
NAPE_ENTFA
[Raw transfer]



CYO_B_2(2NPX)
NAPE_ENTFA
[Raw transfer]



CYO_B_2(1NPX)
NAPE_ENTFA
[Raw transfer]
52 HHSearch 97.8346%-106 - C1 -1NHP 11.9 NAPE_ENTFA
7 PsiBlast_PDB 96.5946% -87 - C1 -1NHS 12.8 NAPE_ENTFA
5 PsiBlast_PDB 95.1346% -83 - C1 -1NPX 13.0 NAPE_ENTFA
2 PsiBlast_PDB 94.9746% -85 - C1 -1NHP 11.9 NAPE_ENTFA
53 HHSearch 94.6346%-101 - C1 -1JOA 12.8 NAPE_ENTFA
3 PsiBlast_PDB 94.3046% -85 - C1 -1NHQ 12.2 NAPE_ENTFA
6 PsiBlast_PDB 94.2446% -85 - C1 -2NPX 12.3 NAPE_ENTFA
1 PsiBlast_PDB 93.8046% -85 - C1 -1NHR 12.7 NAPE_ENTFA
4 PsiBlast_PDB 91.8146% -82 - C1 -1JOA 12.8 NAPE_ENTFA
38 HHSearch 87.8236%-110 * C1 *5ER0 - ? -
22 PsiBlast_CBE 84.4435%-109 - C1 -5ER0 - ? -
8 PsiBlast_PDB 83.8035%-110 - C1 -5ER0 - ? -
23 PsiBlast_CBE 83.7835%-110 - C1 -5ER0 - ? -
21 PsiBlast_CBE 83.5235%-111 - C1 -5ER0 - ? -
24 PsiBlast_CBE 71.8734% -19 - C1 -2BCP - NAOX_STRP6 -
9 PsiBlast_PDB 71.1234% -18 - C1 -2BC1 - NAOX_STRP6 -
25 PsiBlast_CBE 71.0234% -21 - C1 -2BC1 - NAOX_STRP6 -
10 PsiBlast_PDB 70.0034% -21 - C1 -2BCP - NAOX_STRP6 -
47 HHSearch 63.9726% -8 - C1 -3NTD - ? -
51 HHSearch 63.8928% -1 - C1 -3ICT - ? -