@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2A2: (2018-01-29 )
MTLKEEIIQESKRLGIDKIGFTTAEPFDSLKESLEEQKAAGHTSGFEHPNIDERLYPEMTFDQPKSIISIALAYPTRIHEEVPRDEKRGQFARASWGIDYHDILRDRLNRLIEFIQTRAEKWQKEEEWRLAPQVDTGELIDVAVAQRAGLGFIGRNGLLITEEFGSFVYLGEIVTNIVFEPDKPGEFGCGDCMRCVTACPTKALLGDGRMNAQRCLSYQTQTKGMMPEEYRKKMRNVIYGCDICQLVCPYNQGKDFHFHEEMEPKVDEIYPKLKPMLSMSNKDFKQQFGHLAGSWRGKKPLQRNALIALANLGDRTALPEISECLTDVRPVIRGTAAWAIGRLGTKEPEKWLDVLDEILAKETEEVVINELEHAQKLLRRKLK

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

B12_B_12(5D08)
QUEG_BACSU
[Raw transfer]




B12_A_5(5D08)
QUEG_BACSU
[Raw transfer]




B12_A_5(5D08)
QUEG_BACSU
[Raw transfer]




B12_B_11(5D0B)
QUEG_BACSU
[Raw transfer]




B12_A_6(5D0B)
QUEG_BACSU
[Raw transfer]




B12_B_11(5T8Y)
QUEG_BACSU
[Raw transfer]




B12_A_6(5T8Y)
QUEG_BACSU
[Raw transfer]




52 Fugue 78.9549% 2 - C4 -5D6S - ? -
32 HHSearch 78.1953% 10 - C4 -5D08 9.5 QUEG_BACSU
30 HHSearch 77.9249% -2 - C4 -5D6S - ? -
5 PsiBlast_PDB 77.7550% -4 - C4 -5D6S - ? -
29 PsiBlast_CBE 77.5650% -4 - C4 -5D6S - ? -
27 PsiBlast_CBE 77.3350% -3 - C4 -5D6S - ? -
26 PsiBlast_CBE 77.3150% -3 - C4 -5D6S - ? -
31 HHSearch 77.1453% 11 * C4 *5D08 11.3 QUEG_BACSU
28 PsiBlast_CBE 76.5150% -3 - C4 -5D6S - ? -
4 PsiBlast_PDB 74.5155% 11 - C4 -5D08 9.5 QUEG_BACSU
23 PsiBlast_CBE 74.4355% 11 - C4 -5D0A - QUEG_BACSU -
22 PsiBlast_CBE 74.3255% 8 - C4 -5D0B 10.6 QUEG_BACSU
25 PsiBlast_CBE 73.7855% 11 - C4 -5D0A - QUEG_BACSU -
2 PsiBlast_PDB 73.7455% 12 - C4 -5D0B 12.1 QUEG_BACSU
1 PsiBlast_PDB 73.7355% 12 - C4 -5D0A - QUEG_BACSU -
24 PsiBlast_CBE 73.6055% 11 - C4 -5D0A - QUEG_BACSU -
3 PsiBlast_PDB 72.5755% 11 - C4 -5T8Y 10.0 QUEG_BACSU
21 PsiBlast_CBE 72.1055% 15 - C4 -5T8Y 10.7 QUEG_BACSU
9 PsiBlast_PDB 44.8428%-117 - C4 -4XVP - ? -
48 HHSearch 44.5222%-104 - C4 -5DCQ - ? -