@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2G0: (2018-01-30 )
MMLRVEKLRKKMQEENLDSFLVTSPYNLRYLTNFTGTTGLAVITLEKAFFITDFRYTEQAAAQAQGFEIIKNVGPIFDEVANLVRKEELHSLAFEETTVSFLEYSVLEEIIDAELVPVSQMIEELREVKDEEEIAIIEKACHIADMAYDHILKMIQPGMTEIEVANQLDFYMRSLGASGVSFDTIVASGLRSAMPHGVASKKIIEQGDLITLDFGCYYEGYVSDMTRTFAIGDPGEKLKEIYQIVLDAQLAVIDAAKPGMTGVQLDAVARDYISKHGYGEAFGHSTGHGIGLEIHEGPNVSSRAEKQFVPGNVITDEPGIYLPGIGGVRIEDDLLITEDGNRVLTRSPKELIIL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_7(5CNX)
YPDF_ECOLI
[Raw transfer]



GOL_A_7(5CNX)
YPDF_ECOLI
[Raw transfer]



PRO_A_2(2BN7)
AMPP_ECOLI
[Raw transfer]



PRO_A_2(2BH3)
AMPP_ECOLI
[Raw transfer]



CIT_A_3(5CIK)
?
[Raw transfer]



PG4_A_3(1WLR)
AMPP_ECOLI
[Raw transfer]



MRD_A_8(2BHB)
AMPP_ECOLI
[Raw transfer]



MRD_A_6(2BWW)
AMPP_ECOLI
[Raw transfer]



P6G_A_6(3CTZ)
XPP1_HUMAN
[Raw transfer]



IPA_A_7(1WL6)
AMPP_ECOLI
[Raw transfer]



MPD_A_5(2BWT)
AMPP_ECOLI
[Raw transfer]



PEG_B_13(5FCH)
?
[Raw transfer]



PEG_B_12(5FCF)
?
[Raw transfer]
65 HHSearch 90.4556%-101 - C1 -3Q6D - ? -
1 PsiBlast_PDB 89.7555%-100 - C1 -3Q6D - ? -
64 HHSearch 89.2056% -99 - C1 -3Q6D - ? -
21 PsiBlast_CBE 88.7455% -99 - C1 -3Q6D - ? -
57 Fugue 75.7442% -89 - C1 -1PV9 - PEPQ_PYRFU -
2 PsiBlast_PDB 69.5342% -14 - C1 -5CNX - YPDF_ECOLI -
24 PsiBlast_CBE 68.8242% -8 - C1 -5CNX Error YPDF_ECOLI
73 HHSearch 67.6035% 0 - C- -4RGZ - ? -
77 HHSearch 67.5942% -7 - C1 -5CNX Error YPDF_ECOLI
68 HHSearch 66.3441% 19 - C1 -5CDV - ? -
6 PsiBlast_PDB 66.2140% 16 - C1 -5GIU - ? -
70 HHSearch 64.8843% 20 - C1 -1WY2 - PEPQ_PYRHO -
8 PsiBlast_PDB 64.7040% 17 - C1 -5GIQ - ? -
69 HHSearch 64.6943% 26 * C1 *1WY2 - PEPQ_PYRHO -
7 PsiBlast_PDB 64.2840% 19 - C1 -5CDV - ? -
5 PsiBlast_PDB 64.0742% 31 - C1 -1WY2 - PEPQ_PYRHO -
9 PsiBlast_PDB 63.5939% 20 - C1 -5CDL - ? -
3 PsiBlast_PDB 62.4842% 5 - C1 -2ZSG - ? -
29 PsiBlast_CBE 61.6333% 7 - C1 -4ZNG - ? -
66 HHSearch 61.4834% 7 - C1 -4ZNG - ? -
39 PsiBlast_CBE 38.8631% -29 - C1 -1WL6 2.7 AMPP_ECOLI