@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2U7: (2018-02-01 )
MLQLKDIKKYYKVGETTTKALDGVSVAFRQKEFVAILGPSGSGKTTMLNVIGGLDNYDSGDMVINGKSTKDFKDSDWDAYRNNSIGFIFQSYNLIGHLGIIENVELGMTLSGVSKDEKRKRAEDALHRVGLTNHMHKKPNQLSGGQMQRVAIARALANDPDILLCDEPTGALDTETSIQIMELIQELSKEKLVIMVTHNPELAHQYADRIIEFSDGKILTDSHPHIERPKDDQFNLRRTKMSFWTALKLSFNNIRTKKGRTFLTSFASSIGIIGIAIVLSLSSGFQKQIDNTQAETMAKFPITISKVTTNQTRDDAGLGASKADYPDSKTITAKVSEEDKAQHTNKIDQTYVDYVTDIDPNLSNNIGFTRTTGINLLRDVNGKVQPVSFSNQNPDTESLSLSSTMSAMTGVGVSSFPTQLDTSKENFLKDNYSLLAGSYPASATDVVLIVDGNNNTNINALKNLGFDVKEDEKLDFDDIVGTTFKLVNNNTYYTKLPTGNFIPNTDYDAMYQNASDELKISGILRVKSSSTMNLLSPGIAYSDQLTTQIVNENKESEIVKAQRDSGVNVLTTEKVDENAKQTLLSYLGGDSLPSSIMIYPNNFEDKEKILDYLDDYNKGKSDEDKIIYTDLAGTMTELTGGLMDAITYVLIAFAGISLVTSMIMISIITYTSVIERTKEIGVLKALGARKKDITRVFDAETCILGISSGILGVFIAWLATFPINSILYNMTDLKNVAQLNPVHAIILVIVSTILTMLGGHLPARMAAKKDAAIALRAE

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_J_5(3C41)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_A_6(4YMV)
?
[Raw transfer]




ATP_B_6(1L2T)
Y796_METJA
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




ADP_A_3(1F3O)
Y796_METJA
[Raw transfer]




ADP_B_8(3TIF)
Y796_METJA
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




ADP_C_11(4HLU)
ECFA1_THEMA
[Raw transfer]




ATP_C_3(1VCI)
?
[Raw transfer]




ADP_D_7(4HLU)
ECFA1_THEMA
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




126 HHSearch 78.2028% -38 - C2 -5NIL - ? -
19 PsiBlast_PDB 69.9031%-106 - C2 -3TUZ - METN_ECOLI -
41 PsiBlast_CBE 68.9731%-105 - C2 -3TUI - METN_ECOLI -
134 HHSearch 68.7532%-105 - C2 -3TUI - METN_ECOLI -
18 PsiBlast_PDB 68.3831% -97 - C2 -3TUI - METN_ECOLI -
38 PsiBlast_CBE 67.6131%-103 - C2 -3TUZ - METN_ECOLI -
64 PsiBlast_CBE 67.1333%-108 - C2 -3PUV - MALK_ECOLI -
39 PsiBlast_CBE 66.9331%-103 - C2 -3TUZ - METN_ECOLI -
17 PsiBlast_PDB 66.8232%-100 - C2 -3DHW - METN_ECOLI -
52 PsiBlast_CBE 66.6033%-105 - C2 -4KI0 - MALK_ECOLI -
68 PsiBlast_CBE 66.3533%-106 - C2 -2AWN - MALK_ECOLI -
54 PsiBlast_CBE 66.0233%-106 - C2 -3RLF - MALK_ECOLI -
127 HHSearch 65.8833%-110 - C2 -3DHW - METN_ECOLI -
43 PsiBlast_CBE 65.8231% -93 - C2 -3TUI - METN_ECOLI -
58 PsiBlast_CBE 65.8133%-109 - C2 -3PUY - MALK_ECOLI -
20 PsiBlast_PDB 65.6330% -98 - C2 -3TUJ - METN_ECOLI -
60 PsiBlast_CBE 65.5933%-107 - C2 -3PUX - MALK_ECOLI -
53 PsiBlast_CBE 65.4433%-100 - C2 -3RLF - MALK_ECOLI -
129 HHSearch 65.4034%-112 - C2 -3RLF - MALK_ECOLI -
42 PsiBlast_CBE 65.3331% -95 - C2 -3TUI - METN_ECOLI -
46 PsiBlast_CBE 61.0336% -65 - C2 -4YMV 6.1 ?
21 PsiBlast_CBE 60.7846% -18 - C2 -1L2T 6.8 Y796_METJA
22 PsiBlast_CBE 59.9646% -17 - C2 -3TIF 6.6 Y796_METJA
47 PsiBlast_CBE 59.4736% -61 - C2 -4YMU 5.7 ?
5 PsiBlast_PDB 57.6546% -13 - C2 -1F3O 6.0 Y796_METJA
86 PsiBlast_CBE 55.6833%-111 - C2 -1VCI 3.2 ?
87 PsiBlast_CBE 55.1534% -49 - C2 -5X40 5.4 CBIO_RHOCB
88 PsiBlast_CBE 54.1534% -44 - C2 -5X40 5.6 CBIO_RHOCB
85 PsiBlast_CBE 53.2637% -12 - C2 -1B0U 6.0 HISP_SALTY
110 PsiBlast_CBE 45.4933% -22 - C2 -4HLU 4.1 ECFA1_THEMA
109 PsiBlast_CBE 45.0033% -23 - C2 -4HLU 4.9 ECFA1_THEMA