@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : Q3Y2W3: (2018-02-02 )
MKKGKVINSDISRVIAQMGHFDKLSIGDAGMPVPFGTEKIDLAVSNGLPSFLSVLENVLEELEVQSIELAEEIKTMNPEILEKIKLLLPDTPISFIPHEEMKKELNNCHAFIRTGEMTPYANIILVSGVVF

Atome Classification :

(29 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RP5_A_7(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_D_10(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_C_9(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_B_6(3P13)
RBSD_STAA8
[Raw transfer]




RP5_E_12(1OGE)
RBSD_BACSU
[Raw transfer]




RP5_D_11(1OGE)
RBSD_BACSU
[Raw transfer]




RIP_E_12(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_A_7(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_C_7(3P13)
RBSD_STAA8
[Raw transfer]




RIP_B_8(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_B_8(1OGD)
RBSD_BACSU
[Raw transfer]




RIP_A_5(3P13)
RBSD_STAA8
[Raw transfer]




RIP_D_8(3P13)
RBSD_STAA8
[Raw transfer]




GOL_B_6(3P12)
RBSD_STAA8
[Raw transfer]




GOL_D_8(3P12)
RBSD_STAA8
[Raw transfer]




GOL_B_6(3P12)
RBSD_STAA8
[Raw transfer]




RP5_C_9(1OGE)
RBSD_BACSU
[Raw transfer]




RP5_B_8(1OGE)
RBSD_BACSU
[Raw transfer]




GOL_C_7(3P12)
RBSD_STAA8
[Raw transfer]




GOL_C_7(3P12)
RBSD_STAA8
[Raw transfer]




GOL_A_5(3P12)
RBSD_STAA8
[Raw transfer]




GOL_D_11(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_B_9(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_D_10(1OGF)
RBSD_BACSU
[Raw transfer]




GOL_B_8(1OGF)
RBSD_BACSU
[Raw transfer]




41 HHSearch 87.6056% -84 - C3 -3P12 2.7 RBSD_STAA8
1 PsiBlast_PDB 87.2055% -92 - C3 -3P12 2.7 RBSD_STAA8
42 HHSearch 86.9056% -89 - C3 -3P12 2.3 RBSD_STAA8
26 PsiBlast_CBE 86.4055% -88 - C3 -3P12 2.7 RBSD_STAA8
25 PsiBlast_CBE 85.9055% -88 - C3 -3P12 2.3 RBSD_STAA8
23 PsiBlast_CBE 85.7155% -73 - C3 -3P13 3.3 RBSD_STAA8
22 PsiBlast_CBE 85.5055% -84 - C3 -3P13 3.3 RBSD_STAA8
2 PsiBlast_PDB 85.3155% -80 - C3 -3P13 3.3 RBSD_STAA8
39 HHSearch 85.2347%-115 - C3 -3E7N - RBSD_SALTY -
24 PsiBlast_CBE 84.5455% -80 - C3 -3P12 3.6 RBSD_STAA8
40 HHSearch 83.8347%-101 - C3 -3E7N - RBSD_SALTY -
37 PsiBlast_CBE 83.4443%-114 - C3 -1OGD 3.2 RBSD_BACSU
21 PsiBlast_CBE 83.3355% -69 - C3 -3P13 3.4 RBSD_STAA8
7 PsiBlast_PDB 83.2743%-117 - C3 -1OGF - RBSD_BACSU -
33 PsiBlast_CBE 83.2143%-114 - C3 -1OGE 2.8 RBSD_BACSU
29 PsiBlast_CBE 82.5343%-117 - C3 -1OGF 2.7 RBSD_BACSU
6 PsiBlast_PDB 82.4343%-115 - C3 -1OGE 2.8 RBSD_BACSU
32 PsiBlast_CBE 82.3143%-114 - C3 -1OGE 2.7 RBSD_BACSU
4 PsiBlast_PDB 82.2643%-112 - C3 -1OGC - RBSD_BACSU -
31 PsiBlast_CBE 82.1643%-116 - C3 -1OGE 2.9 RBSD_BACSU
59 Fugue 82.1143%-110 - C3 -1OGD 3.2 RBSD_BACSU
44 HHSearch 81.7444%-110 - C3 -1OGD 3.3 RBSD_BACSU
35 PsiBlast_CBE 81.7243%-112 - C3 -1OGD 3.1 RBSD_BACSU
36 PsiBlast_CBE 81.5843%-108 - C3 -1OGD 3.2 RBSD_BACSU
38 PsiBlast_CBE 81.3743%-110 - C3 -1OGD 3.3 RBSD_BACSU
27 PsiBlast_CBE 81.3443%-116 - C3 -1OGF 2.7 RBSD_BACSU
28 PsiBlast_CBE 81.1943%-115 - C3 -1OGF 2.7 RBSD_BACSU
34 PsiBlast_CBE 80.7743%-111 - C3 -1OGE 2.9 RBSD_BACSU
30 PsiBlast_CBE 80.5943%-120 - C3 -1OGF 2.6 RBSD_BACSU